| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893166
Identifier: 51893166
GI number: 51893166
Start: 2170307
End: 2171074
Strand: Reverse
Name: 51893166
Synonym: STH2028
Alternate gene names: NA
Gene position: 2171074-2170307 (Counterclockwise)
Preceding gene: 51893167
Following gene: 51893164
Centisome position: 60.88
GC content: 75.52
Gene sequence:
>768_bases GTGGCCATGCCGTACGAGCTGCGCGACCTGGCGCCGGCTCTGGAGTACGCCGGACGCCATCCGGAGGCGGGTTTTGCTCT GCTCCGGTCGCTCCAGTCGGGACTGCGACCGGGTCTGGCCGCGATCGTGGACGACCCGGAGCGGGTGACCGCGGTCATGC TGGTCCACCGGCCCGACTGGCGGAAGCGGGATCCGCTCCCCACCCACATCCAGCTGGACGCCGAGACCGCCGGGGCCGCC CTGCGGCTGCTGGCGTGGGTCCCGCCGGGGGCGGAGGTCCGGCTCACCACGTACCGGCCGTGGCTGCACGAGCTGGCCCT GGGCGTGCTCGAGGGCGCACGGACGGTTCAGCACGTGCTCTGCGTGGCCGACGCGCAGCGGTTCCGGCCCGATCCCGGCA CGGACCTGGCCGTGGAGATCGGGGCCGATCAGGTCGCACAGGCAGGCCACGACGGCGCGGTCGGGCCGGAGGAGGGGGAC CGGCTGTTCGGCGTGGTGCGGGAAGGCCGGCTGCTCGCCTGCGCTGCCCTGGGCCCGCCCGAGAACGGATACGCGCCGGT GCGGTGCCTGTTCCCGGCATCGCCGGAAGGGCGGCAGGGCTGCGGTGCCGCCGCGCTCTCCGCCGCCGTGCAGGCCGCGC TCCAGGCAGGTCACAGGGTGCTGTGCAGGCTGCCCGCGTCGGAGCTTCCGCTGCTGCACCTGGCCGCCCGGCTGGGGCTC TCGCCGGTCTGTCGGGAGTGGAGCGCGGAGGGGCGGGTCAGGCGGTGA
Upstream 100 bases:
>100_bases CCGGGAGCACTGGGACGCCCTGGAGCGGTACGGGCCGTGCCCGCTGCACCGGCGGACCTTCATCGGCCCGCGGCAGATCC GGTTCTTCTGATTCGGAGGG
Downstream 100 bases:
>100_bases ACGATGAACGGCGCATTCCGGGCGGAATGCGCCGTTTGGGTTTTCTTGTGGATTCACCAGTCCTCCGTGTGCCCGGTGAG CAACTGCTCCCGCCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MAMPYELRDLAPALEYAGRHPEAGFALLRSLQSGLRPGLAAIVDDPERVTAVMLVHRPDWRKRDPLPTHIQLDAETAGAA LRLLAWVPPGAEVRLTTYRPWLHELALGVLEGARTVQHVLCVADAQRFRPDPGTDLAVEIGADQVAQAGHDGAVGPEEGD RLFGVVREGRLLACAALGPPENGYAPVRCLFPASPEGRQGCGAAALSAAVQAALQAGHRVLCRLPASELPLLHLAARLGL SPVCREWSAEGRVRR
Sequences:
>Translated_255_residues MAMPYELRDLAPALEYAGRHPEAGFALLRSLQSGLRPGLAAIVDDPERVTAVMLVHRPDWRKRDPLPTHIQLDAETAGAA LRLLAWVPPGAEVRLTTYRPWLHELALGVLEGARTVQHVLCVADAQRFRPDPGTDLAVEIGADQVAQAGHDGAVGPEEGD RLFGVVREGRLLACAALGPPENGYAPVRCLFPASPEGRQGCGAAALSAAVQAALQAGHRVLCRLPASELPLLHLAARLGL SPVCREWSAEGRVRR >Mature_254_residues AMPYELRDLAPALEYAGRHPEAGFALLRSLQSGLRPGLAAIVDDPERVTAVMLVHRPDWRKRDPLPTHIQLDAETAGAAL RLLAWVPPGAEVRLTTYRPWLHELALGVLEGARTVQHVLCVADAQRFRPDPGTDLAVEIGADQVAQAGHDGAVGPEEGDR LFGVVREGRLLACAALGPPENGYAPVRCLFPASPEGRQGCGAAALSAAVQAALQAGHRVLCRLPASELPLLHLAARLGLS PVCREWSAEGRVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27280; Mature: 27148
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMPYELRDLAPALEYAGRHPEAGFALLRSLQSGLRPGLAAIVDDPERVTAVMLVHRPDW CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHEEEEEEEECCCC RKRDPLPTHIQLDAETAGAALRLLAWVPPGAEVRLTTYRPWLHELALGVLEGARTVQHVL CCCCCCCCEEEECCHHHHHHHHHHEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH CVADAQRFRPDPGTDLAVEIGADQVAQAGHDGAVGPEEGDRLFGVVREGRLLACAALGPP HHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCC ENGYAPVRCLFPASPEGRQGCGAAALSAAVQAALQAGHRVLCRLPASELPLLHLAARLGL CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHCHHHHHHHHHCC SPVCREWSAEGRVRR CHHHHHHCCCCCCCC >Mature Secondary Structure AMPYELRDLAPALEYAGRHPEAGFALLRSLQSGLRPGLAAIVDDPERVTAVMLVHRPDW CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCHHHEEEEEEEECCCC RKRDPLPTHIQLDAETAGAALRLLAWVPPGAEVRLTTYRPWLHELALGVLEGARTVQHVL CCCCCCCCEEEECCHHHHHHHHHHEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH CVADAQRFRPDPGTDLAVEIGADQVAQAGHDGAVGPEEGDRLFGVVREGRLLACAALGPP HHHHHHHCCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCC ENGYAPVRCLFPASPEGRQGCGAAALSAAVQAALQAGHRVLCRLPASELPLLHLAARLGL CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCHHCHHHHHHHHHCC SPVCREWSAEGRVRR CHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA