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The map label for this gene is nudF [H]

Identifier: 51893164

GI number: 51893164

Start: 2168663

End: 2169175

Strand: Reverse

Name: nudF [H]

Synonym: STH2026

Alternate gene names: 51893164

Gene position: 2169175-2168663 (Counterclockwise)

Preceding gene: 51893166

Following gene: 51893159

Centisome position: 60.83

GC content: 71.15

Gene sequence:

>513_bases
GTGGAGGAGACGCTGAGGTTCTGTGCTGCCTGCGGCGGACGGCTGGAGCTGCGATTCGTGGCGGAAGAGGGCAAGGAGCG
GCTGGTCTGCCGCGCCTGCGGCCGCATTACGTACCTGGATCCCAAGATCTCGGCCTGTACCGTGCCGGTGCTGGACGGCC
GGATCCTGCTCGCGCGGCGGGGGATCGAGCCCGCCCGGGGCCGCTGGGTTTTCCCGGGCGGCTACATGGAACGGGGCGAG
ACCGTCCCGCAGGCCGCGGAGCGGGAGACCTTCGAGGAGGTGGGCCTGCGGGTGCGGGCCACGCGCCCGGTCGGCATCTA
TTCCTACCCCGACTCGGTGGTCGTGGTGATCGTCTACCACTGCGAGGTGCTGGGCGGCGAGCCGGCCCCCAACAGCGAGA
CGCTGGAGGTGCGGCTCTTTTCGCCCGATGAGATCCCCTGGGACGAGCTGGCCTTCCCCAGCACGCGCGACGCCCTGCGG
GACTTCTTGGCCCAGTGGGGCCGGCAGGCGTAG

Upstream 100 bases:

>100_bases
AGATGATGCCACAGCGGCAAATGGTTCGCCAGGAGTCGGCGCCAGGGCGTGGAATTCTTACGGCGGAGGCGGGCGCCAGG
GGGGCCCGCTTCGTCGGGAG

Downstream 100 bases:

>100_bases
GTCGGCTCAGCGGCGCGCGGCCGCGGGCAGCTCGCCCACCCGGACCGGCACCTGGAGGAGCCGACCGCCCCGCAGCACGG
TGAAGGGGACGGTCGCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MEETLRFCAACGGRLELRFVAEEGKERLVCRACGRITYLDPKISACTVPVLDGRILLARRGIEPARGRWVFPGGYMERGE
TVPQAAERETFEEVGLRVRATRPVGIYSYPDSVVVVIVYHCEVLGGEPAPNSETLEVRLFSPDEIPWDELAFPSTRDALR
DFLAQWGRQA

Sequences:

>Translated_170_residues
MEETLRFCAACGGRLELRFVAEEGKERLVCRACGRITYLDPKISACTVPVLDGRILLARRGIEPARGRWVFPGGYMERGE
TVPQAAERETFEEVGLRVRATRPVGIYSYPDSVVVVIVYHCEVLGGEPAPNSETLEVRLFSPDEIPWDELAFPSTRDALR
DFLAQWGRQA
>Mature_170_residues
MEETLRFCAACGGRLELRFVAEEGKERLVCRACGRITYLDPKISACTVPVLDGRILLARRGIEPARGRWVFPGGYMERGE
TVPQAAERETFEEVGLRVRATRPVGIYSYPDSVVVVIVYHCEVLGGEPAPNSETLEVRLFSPDEIPWDELAFPSTRDALR
DFLAQWGRQA

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 19073; Mature: 19073

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEETLRFCAACGGRLELRFVAEEGKERLVCRACGRITYLDPKISACTVPVLDGRILLARR
CCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCCCEEEEEEECCEEEEEEC
GIEPARGRWVFPGGYMERGETVPQAAERETFEEVGLRVRATRPVGIYSYPDSVVVVIVYH
CCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEECCCCEEEEEEEE
CEVLGGEPAPNSETLEVRLFSPDEIPWDELAFPSTRDALRDFLAQWGRQA
HEEECCCCCCCCCEEEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEETLRFCAACGGRLELRFVAEEGKERLVCRACGRITYLDPKISACTVPVLDGRILLARR
CCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCCCEEEEEEECCEEEEEEC
GIEPARGRWVFPGGYMERGETVPQAAERETFEEVGLRVRATRPVGIYSYPDSVVVVIVYH
CCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCCEEEEECCCCEEEEEEEE
CEVLGGEPAPNSETLEVRLFSPDEIPWDELAFPSTRDALRDFLAQWGRQA
HEEECCCCCCCCCEEEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]