| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is folD
Identifier: 51892985
GI number: 51892985
Start: 1992453
End: 1993313
Strand: Reverse
Name: folD
Synonym: STH1847
Alternate gene names: 51892985
Gene position: 1993313-1992453 (Counterclockwise)
Preceding gene: 51892986
Following gene: 51892984
Centisome position: 55.9
GC content: 69.34
Gene sequence:
>861_bases GTGACTGCAGGAGTGATCGACGGCAAGCAGGTCGCGGCTCAGGTGCAGGAAGAGGTGGCGCGGGAGGTGGCCGCCCTGAA GGCGGAGGGCCTCACGCCGGGGCTGGCGGTGGTGCTGGTGGGCGACGACCCCGCCAGCAAGGTCTACACGGCCAACAAGG AGCGGACGGCCAAAGAGCTGGGCATGCACTCGGTGCTCTACCACCTGCCCGCGACGACCACCCAGCAGGAGCTGGCGGAC CTGGTCATGCAGCTCAACCGGGACCCCGCCATCCACGGCATCCTCGTGCAGTCGCCGCTGCCGGAAGGGCTGGACATGGA CGCCGTCATCCGGCTCATCGACCCGCGGAAGGACGTGGACGGCTTCCATCCCGAGAATGTGGGCCGGCTGTGGATCGGTC AGGACGGGCTGGTGCCCTGTACGCCGGCGGGCGTCATGCGGTTGCTGGACGCCTACGGCGTTGACCCGAAGGGCAAACAC GCGGTGGTGGTCGGCCGGTCCAACATCGTCGGCAAACCCATGGCGGCCCTGCTGCTACAGCGGCACGCGACCGTGACCAT CTGCCACTCCCGCACGCCGGACCTGGCGGAGACCTGCCGCCGGGCCGACATCCTGGTGGCCGCTGTGGGCCGGCTGCAGA TGATCACCGCGGAGCACGTCAAGCCCGGCGCCGTGGTGATCGACGTGGGCATCAACCCGGTTCCCGGCTTCAAGAAGCGC ATCCGGGGCGACGTCGACTTCGACAGCGTCCAGGAGGTCGCCGGCCTCATCACGCCGGTGCCGGGGGGCGTGGGGCCAAT GACGATCGCCATGCTGATGGCGAACACGGTCAAGGCGGCCAGAATGCAGACCGGCCGGTAG
Upstream 100 bases:
>100_bases CCGCGGTTCAGCACGGACAACGCAGTCGGCACGGCCCTGCTCGCACGGGCGTGCCACGGCGTGTCGTCATAGAAGACGAC GAGGAAACGGAGGCGATCGC
Downstream 100 bases:
>100_bases GCTGCGCCCCGCCGGACGGCCTCACGGGTGCGCGAGGCAGCCCCTTCCGGGCGCATGAGGAGGCGATGCTTTGGAGTCCT TCGCTCTGGCGGAGAGCGGG
Product: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTAGVIDGKQVAAQVQEEVAREVAALKAEGLTPGLAVVLVGDDPASKVYTANKERTAKELGMHSVLYHLPATTTQQELAD LVMQLNRDPAIHGILVQSPLPEGLDMDAVIRLIDPRKDVDGFHPENVGRLWIGQDGLVPCTPAGVMRLLDAYGVDPKGKH AVVVGRSNIVGKPMAALLLQRHATVTICHSRTPDLAETCRRADILVAAVGRLQMITAEHVKPGAVVIDVGINPVPGFKKR IRGDVDFDSVQEVAGLITPVPGGVGPMTIAMLMANTVKAARMQTGR
Sequences:
>Translated_286_residues MTAGVIDGKQVAAQVQEEVAREVAALKAEGLTPGLAVVLVGDDPASKVYTANKERTAKELGMHSVLYHLPATTTQQELAD LVMQLNRDPAIHGILVQSPLPEGLDMDAVIRLIDPRKDVDGFHPENVGRLWIGQDGLVPCTPAGVMRLLDAYGVDPKGKH AVVVGRSNIVGKPMAALLLQRHATVTICHSRTPDLAETCRRADILVAAVGRLQMITAEHVKPGAVVIDVGINPVPGFKKR IRGDVDFDSVQEVAGLITPVPGGVGPMTIAMLMANTVKAARMQTGR >Mature_285_residues TAGVIDGKQVAAQVQEEVAREVAALKAEGLTPGLAVVLVGDDPASKVYTANKERTAKELGMHSVLYHLPATTTQQELADL VMQLNRDPAIHGILVQSPLPEGLDMDAVIRLIDPRKDVDGFHPENVGRLWIGQDGLVPCTPAGVMRLLDAYGVDPKGKHA VVVGRSNIVGKPMAALLLQRHATVTICHSRTPDLAETCRRADILVAAVGRLQMITAEHVKPGAVVIDVGINPVPGFKKRI RGDVDFDSVQEVAGLITPVPGGVGPMTIAMLMANTVKAARMQTGR
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=289, Percent_Identity=46.0207612456747, Blast_Score=247, Evalue=8e-66, Organism=Homo sapiens, GI222418558, Length=292, Percent_Identity=46.2328767123288, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI94721354, Length=294, Percent_Identity=45.9183673469388, Blast_Score=215, Evalue=4e-56, Organism=Homo sapiens, GI36796743, Length=225, Percent_Identity=29.3333333333333, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1786741, Length=281, Percent_Identity=50.5338078291815, Blast_Score=255, Evalue=2e-69, Organism=Caenorhabditis elegans, GI17568735, Length=292, Percent_Identity=46.9178082191781, Blast_Score=236, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6319558, Length=287, Percent_Identity=44.5993031358885, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6321643, Length=301, Percent_Identity=43.1893687707641, Blast_Score=225, Evalue=7e-60, Organism=Saccharomyces cerevisiae, GI6322933, Length=318, Percent_Identity=24.8427672955975, Blast_Score=86, Evalue=5e-18, Organism=Drosophila melanogaster, GI17136816, Length=295, Percent_Identity=49.4915254237288, Blast_Score=262, Evalue=2e-70, Organism=Drosophila melanogaster, GI17136818, Length=295, Percent_Identity=49.4915254237288, Blast_Score=261, Evalue=3e-70, Organism=Drosophila melanogaster, GI62472483, Length=287, Percent_Identity=46.6898954703833, Blast_Score=236, Evalue=9e-63, Organism=Drosophila melanogaster, GI45551871, Length=287, Percent_Identity=46.6898954703833, Blast_Score=236, Evalue=9e-63, Organism=Drosophila melanogaster, GI24645718, Length=287, Percent_Identity=46.6898954703833, Blast_Score=236, Evalue=1e-62, Organism=Drosophila melanogaster, GI17137370, Length=287, Percent_Identity=46.6898954703833, Blast_Score=236, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_SYMTH (Q67NB1)
Other databases:
- EMBL: AP006840 - RefSeq: YP_075676.1 - HSSP: P11586 - ProteinModelPortal: Q67NB1 - SMR: Q67NB1 - GeneID: 2979342 - GenomeReviews: AP006840_GR - KEGG: sth:STH1847 - NMPDR: fig|292459.1.peg.1782 - HOGENOM: HBG328751 - OMA: TYVRNKQ - BioCyc: STHE292459:STH1847-MONOMER - BRENDA: 1.5.1.5 - BRENDA: 3.5.4.9 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 30375; Mature: 30244
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGVIDGKQVAAQVQEEVAREVAALKAEGLTPGLAVVLVGDDPASKVYTANKERTAKEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHHHHHH GMHSVLYHLPATTTQQELADLVMQLNRDPAIHGILVQSPLPEGLDMDAVIRLIDPRKDVD HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCC GFHPENVGRLWIGQDGLVPCTPAGVMRLLDAYGVDPKGKHAVVVGRSNIVGKPMAALLLQ CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHH RHATVTICHSRTPDLAETCRRADILVAAVGRLQMITAEHVKPGAVVIDVGINPVPGFKKR CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH IRGDVDFDSVQEVAGLITPVPGGVGPMTIAMLMANTVKAARMQTGR HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAGVIDGKQVAAQVQEEVAREVAALKAEGLTPGLAVVLVGDDPASKVYTANKERTAKEL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCHHHHHHHH GMHSVLYHLPATTTQQELADLVMQLNRDPAIHGILVQSPLPEGLDMDAVIRLIDPRKDVD HHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCC GFHPENVGRLWIGQDGLVPCTPAGVMRLLDAYGVDPKGKHAVVVGRSNIVGKPMAALLLQ CCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHH RHATVTICHSRTPDLAETCRRADILVAAVGRLQMITAEHVKPGAVVIDVGINPVPGFKKR CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHH IRGDVDFDSVQEVAGLITPVPGGVGPMTIAMLMANTVKAARMQTGR HCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA