| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is resB [H]
Identifier: 51892869
GI number: 51892869
Start: 1880862
End: 1882382
Strand: Reverse
Name: resB [H]
Synonym: STH1731
Alternate gene names: 51892869
Gene position: 1882382-1880862 (Counterclockwise)
Preceding gene: 51892870
Following gene: 51892868
Centisome position: 52.78
GC content: 66.67
Gene sequence:
>1521_bases GTGTGGCTTGACTGGCAAGGGGGGAGTTTCGCACTGGCCGCAGTACACGCAGCCAACTGTCCGGACTGTCAGCGGCCGCT GCCGGCGGGGGCACACTTCTGCCCGCACTGCGGACGGGCCTTGGGGGACCGGTCCAGGGCGCGGGTGGAGGGGCCGAACC CGTGGGTGGTCCTGCTGGACCGGACGTGGGATTTCTTTGCCTCGACCAAGGTCGCCTCATGGATCATCATCGCCCTGGCG ATCGCGTCGATTGCCGGCACGGTGATCGAACAGGAAGGGATGTACCAGGACTGGCGGCCGCCCGAGCTGTACTACCCTGA CCGCTACGGGGAGTTCTGGGGCAGCCTCTTCCTCAGGCTCGGCCTGACGCACGCCTACTCCTCGTGGTGGTACGCCGCCC TGGTCATGATGCTGGTCATCAGCCTGGTCATCTGCTCCCTGCACCGGCTCGTGCCGCTGCACCGGCAGCTGACCCGCCCA CAGGTGTGGAAGCTGCCCCAGTACCTGCGCAAGCAGCAGGTGGTCCTGGAGGTCCCCGGCGACCTGCAGCAGGCGGAGGA GAGGCTGAAGCGGGCGGGGTACCGGATCTGGCGGGACCGGGAATGCCTCTACGCCGAGAAGGGCCGGCTGAGCCGCTACG GGCCGTACATCCTGCACATCGGCCTGCTGGTGGTCTGCTTCGCCGCCTTCGCCAAGGCCCTTCCGGGCTGGGATGAGGTG CAGGACGTCTGGATTCCGGACGGACAGACGGTGAAGGTTCCGGGGGAGAACTTTGCCATCACGAACCACAAGTTCACGAT GGAGCTCTACGAGAACGGCATGCCCTCGCGGTATGCCACCGACGCCTCGATCATCGTGGACGGTGAGGAGGTGCTCCGCC GGACCATCGAGGTGAACAAGCCGCTCAAGTACGGCGGCTGGGAGATCTACCAGGCCTCCTGGCGGGAGGAGCCCGGGGTG GCGCACCTGCGGCTCGTGGAGGCGGACACCGGGAGTGCGGTGGCCACCGTCGCCTTTGACCTGCGGGATCCGTCGCCGGA GTACTCGCTGGAGGGCACGGGGCTGAAGCTGGTGGTCCTCACCTACCTGCACGATTTCGTTCTGGACCCCGAGACCAACC AGCCCACCAACGCCTCCTACGAGGTGCGCAACCCGGTGCTCTTTGCGGAGGTGGCGACCGCGGATGGTTCCGAGATGGTG GGCCGGATCGCCCTGGCCATGGCCGGGGGGTCCGAGGTGGTGTACACCGGTCCGTACTACCTGGAGCTGGACCGGGTCGA GAGCCGCTGGTACACGGCCCTGAAGCTGCACCACGACCGGACCGTGCCCTACATGTACTTCGGGCTCGCGGTCGTGTTCG TGGGCATGGTGATCACCTTCTTCATCTACCACTGGCAGGTCTGGGTCCGTGAGGAGAACGGAGGGATCCTCATCGGCGCC CGGGCGTACAAGAACCGGTTTGCGCTGGCGCGGGAGATCAAGCGAATCTTCGGCGCACCCCAGGGGGAGGGGTTGAACTG A
Upstream 100 bases:
>100_bases GTTCATGGGCATCCTGCTCGCGACCGGCGGGCTGGAGCGCATTTCGGCCTGGCTCCTGGAGATCACGGGGTTTACGGGGT TCTGACGGCAACCCTGTCTC
Downstream 100 bases:
>100_bases CATGACACCGGCTAACCAGTTTCTGCTGGATGCCGCCCAGTGGCTGTTGCTCGGCGCCTTTGCGTCCTACCTTGTCGCGT TCCTGCTGTACGTCTCAGGC
Product: cytochrome C biogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLDRTWDFFASTKVASWIIIALA IASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRLGLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRP QVWKLPQYLRKQQVVLEVPGDLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNKPLKYGGWEIYQASWREEPGV AHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVLTYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMV GRIALAMAGGSEVVYTGPYYLELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA RAYKNRFALAREIKRIFGAPQGEGLN
Sequences:
>Translated_506_residues MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLDRTWDFFASTKVASWIIIALA IASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRLGLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRP QVWKLPQYLRKQQVVLEVPGDLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNKPLKYGGWEIYQASWREEPGV AHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVLTYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMV GRIALAMAGGSEVVYTGPYYLELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA RAYKNRFALAREIKRIFGAPQGEGLN >Mature_506_residues MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLDRTWDFFASTKVASWIIIALA IASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRLGLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRP QVWKLPQYLRKQQVVLEVPGDLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNKPLKYGGWEIYQASWREEPGV AHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVLTYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMV GRIALAMAGGSEVVYTGPYYLELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA RAYKNRFALAREIKRIFGAPQGEGLN
Specific function: Required for the biogenesis of c-type cytochromes [H]
COG id: COG1333
COG function: function code O; ResB protein required for cytochrome c biosynthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007816 [H]
Pfam domain/function: PF05140 ResB [H]
EC number: NA
Molecular weight: Translated: 57440; Mature: 57440
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLD CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCEEEEEE RTWDFFASTKVASWIIIALAIASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRPQVWKLPQYLRKQQVVLEVPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCC DLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV CHHHHHHHHHHCCCCEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNK CEEECCCCCEEEECCCCEEEECCEEEEEHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCC PLKYGGWEIYQASWREEPGVAHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVL CCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEECCCCEEEHHH TYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMVGRIALAMAGGSEVVYTGPYY HHHHHHHCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHEEEEEECCCEEEEECCEE LELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA EEEECHHCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEE RAYKNRFALAREIKRIFGAPQGEGLN HHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLD CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCEEEEEE RTWDFFASTKVASWIIIALAIASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRPQVWKLPQYLRKQQVVLEVPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCC DLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV CHHHHHHHHHHCCCCEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNK CEEECCCCCEEEECCCCEEEECCEEEEEHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCC PLKYGGWEIYQASWREEPGVAHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVL CCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEECCCCEEEHHH TYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMVGRIALAMAGGSEVVYTGPYY HHHHHHHCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHEEEEEECCCEEEEECCEE LELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA EEEECHHCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEE RAYKNRFALAREIKRIFGAPQGEGLN HHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]