Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is resC [H]

Identifier: 51892868

GI number: 51892868

Start: 1879541

End: 1880860

Strand: Reverse

Name: resC [H]

Synonym: STH1730

Alternate gene names: 51892868

Gene position: 1880860-1879541 (Counterclockwise)

Preceding gene: 51892869

Following gene: 51892866

Centisome position: 52.74

GC content: 67.42

Gene sequence:

>1320_bases
ATGACACCGGCTAACCAGTTTCTGCTGGATGCCGCCCAGTGGCTGTTGCTCGGCGCCTTTGCGTCCTACCTTGTCGCGTT
CCTGCTGTACGTCTCAGGCACCCTGGGCAGGCGGATTTCCGGGGGCACCCGGTTCACCCGCACGCCCGGCCACGGCACGG
TAGCCAACGTCATCGGCGTGGTCCTGCACGGCCTCGCGATCCTGGCCCGGTGGCAGGGATCCGGGTTCTGGCCGACGTCC
AACATGTATGAGTTCATCGGGTTCATGGCGTTCTCGAGCATGGTGGCCTTCCTGGTCCTGCACGGGATGTACCGGCTGTA
TGTGCTCGGCGCGCTGGTGACCCCGGTGACCATTGCGCTGCTGGCCTACTCGTACGTCTTCCCGCCCGAGGTCACGCCCC
TGATCCCGGCCTTGCAATCTTACTGGCTGCCGCTGCACGTCAGCCTGGCGGCCCTGGGCGAGGGCTTCTTCGCCGTGGCC
TTCGGCGCGGCGCTGCTCTACCTGCTCCGGGTGCGCGGGATGGAGATCGCACAGGCCCGGGCCGTGAGCGAGGCGGCGGC
CGGAATGGAGACCGCCGCGCCGATGGCGGGGGCCGCTCCGATGGCTGGGGCCGCGCCGGGCGTCGCCGCGGAGAGCCGCT
GGGAGCGCATCTGGGGCGTCCGGCTGTTGGAAATCGTCTTCTATCTCATCCTGGTCCTGCTCGGCTTCACCGTGTTGGCC
CTGTTCTTCCGGTACGCCGGCTTCCAGTGGATCTTCAACAACGGCATGACCACCTACCACCTGCCGCCCATCATCGGACC
GTACGGCGCCGAGGTGGGGGAGAAGGGGACGATCCTCGGGATTCCGCTGCCCACCGTGGTCGTGCCCTTCGGCTGGCGGG
GCAAGCACCTCAACACGCTGCTCTACTCGGTGGTGATCGGCGCTTTCCTGTACGGGTTCATCCGGCGGTTCGTTACCAGG
GGCCGCATCGGCGACGCCCTGGCCCTGCGGGTGACCGCAGACCCGGAGTTGCTGGACGAGATCAGCTACCGGGCGGTGGC
GATTGGTTATCCGATCTTCACCCTCGGCGGCCTGATCTTCGCCATGATGTGGGCCAAGGAGGCCTGGGGCCGCTACTGGA
TGTGGGACCCCAAGGAGACCTGGGCGTTCATCGCCTGGCTCGTGTACTCCGCCTACCTGCACTTCCGGATCACCCACGGG
TGGGAGGGGCGCCGTTCCGCCTGGCTGGCCGTGCTGGGCTTCGGCGTCATCCTGTTCACCCTGGTGGGCGTCAACCTGCT
GATCGTCGGCCTGCACTCCTACGCCGGCGGCGATCTGTGA

Upstream 100 bases:

>100_bases
GGGATCCTCATCGGCGCCCGGGCGTACAAGAACCGGTTTGCGCTGGCGCGGGAGATCAAGCGAATCTTCGGCGCACCCCA
GGGGGAGGGGTTGAACTGAC

Downstream 100 bases:

>100_bases
CCACCGAACGCAGAACGGGACCCGCCCTTCATGGGGCGGGTCCCCTGCCGTATCAGCGGGGATGCAACACGATCTCCTGC
TGCACGACTGACGCCCGTGC

Product: cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MTPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGVVLHGLAILARWQGSGFWPTS
NMYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIALLAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVA
FGAALLYLLRVRGMEIAQARAVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLA
LFFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTLLYSVVIGAFLYGFIRRFVTR
GRIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIFAMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHG
WEGRRSAWLAVLGFGVILFTLVGVNLLIVGLHSYAGGDL

Sequences:

>Translated_439_residues
MTPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGVVLHGLAILARWQGSGFWPTS
NMYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIALLAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVA
FGAALLYLLRVRGMEIAQARAVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLA
LFFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTLLYSVVIGAFLYGFIRRFVTR
GRIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIFAMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHG
WEGRRSAWLAVLGFGVILFTLVGVNLLIVGLHSYAGGDL
>Mature_438_residues
TPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGVVLHGLAILARWQGSGFWPTSN
MYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIALLAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVAF
GAALLYLLRVRGMEIAQARAVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLAL
FFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTLLYSVVIGAFLYGFIRRFVTRG
RIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIFAMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHGW
EGRRSAWLAVLGFGVILFTLVGVNLLIVGLHSYAGGDL

Specific function: Required for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR017562 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 48167; Mature: 48036

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHH
VLHGLAILARWQGSGFWPTSNMYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIAL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVAFGAALLYLLRVRGMEIAQAR
HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH
AVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLA
HHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTL
HHHHHCCHHEEECCCCEEEECCCCCCCCCCCCCCCCCEEECCHHHHEECCCCCCHHHHHH
LYSVVIGAFLYGFIRRFVTRGRIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIF
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHEEECCHHHHHHHHHH
AMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHGWEGRRSAWLAVLGFGVILFT
HHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH
LVGVNLLIVGLHSYAGGDL
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHH
VLHGLAILARWQGSGFWPTSNMYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIAL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVAFGAALLYLLRVRGMEIAQAR
HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH
AVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLA
HHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTL
HHHHHCCHHEEECCCCEEEECCCCCCCCCCCCCCCCCEEECCHHHHEECCCCCCHHHHHH
LYSVVIGAFLYGFIRRFVTRGRIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIF
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHEEECCHHHHHHHHHH
AMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHGWEGRRSAWLAVLGFGVILFT
HHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH
LVGVNLLIVGLHSYAGGDL
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715 [H]