| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is resC [H]
Identifier: 51892868
GI number: 51892868
Start: 1879541
End: 1880860
Strand: Reverse
Name: resC [H]
Synonym: STH1730
Alternate gene names: 51892868
Gene position: 1880860-1879541 (Counterclockwise)
Preceding gene: 51892869
Following gene: 51892866
Centisome position: 52.74
GC content: 67.42
Gene sequence:
>1320_bases ATGACACCGGCTAACCAGTTTCTGCTGGATGCCGCCCAGTGGCTGTTGCTCGGCGCCTTTGCGTCCTACCTTGTCGCGTT CCTGCTGTACGTCTCAGGCACCCTGGGCAGGCGGATTTCCGGGGGCACCCGGTTCACCCGCACGCCCGGCCACGGCACGG TAGCCAACGTCATCGGCGTGGTCCTGCACGGCCTCGCGATCCTGGCCCGGTGGCAGGGATCCGGGTTCTGGCCGACGTCC AACATGTATGAGTTCATCGGGTTCATGGCGTTCTCGAGCATGGTGGCCTTCCTGGTCCTGCACGGGATGTACCGGCTGTA TGTGCTCGGCGCGCTGGTGACCCCGGTGACCATTGCGCTGCTGGCCTACTCGTACGTCTTCCCGCCCGAGGTCACGCCCC TGATCCCGGCCTTGCAATCTTACTGGCTGCCGCTGCACGTCAGCCTGGCGGCCCTGGGCGAGGGCTTCTTCGCCGTGGCC TTCGGCGCGGCGCTGCTCTACCTGCTCCGGGTGCGCGGGATGGAGATCGCACAGGCCCGGGCCGTGAGCGAGGCGGCGGC CGGAATGGAGACCGCCGCGCCGATGGCGGGGGCCGCTCCGATGGCTGGGGCCGCGCCGGGCGTCGCCGCGGAGAGCCGCT GGGAGCGCATCTGGGGCGTCCGGCTGTTGGAAATCGTCTTCTATCTCATCCTGGTCCTGCTCGGCTTCACCGTGTTGGCC CTGTTCTTCCGGTACGCCGGCTTCCAGTGGATCTTCAACAACGGCATGACCACCTACCACCTGCCGCCCATCATCGGACC GTACGGCGCCGAGGTGGGGGAGAAGGGGACGATCCTCGGGATTCCGCTGCCCACCGTGGTCGTGCCCTTCGGCTGGCGGG GCAAGCACCTCAACACGCTGCTCTACTCGGTGGTGATCGGCGCTTTCCTGTACGGGTTCATCCGGCGGTTCGTTACCAGG GGCCGCATCGGCGACGCCCTGGCCCTGCGGGTGACCGCAGACCCGGAGTTGCTGGACGAGATCAGCTACCGGGCGGTGGC GATTGGTTATCCGATCTTCACCCTCGGCGGCCTGATCTTCGCCATGATGTGGGCCAAGGAGGCCTGGGGCCGCTACTGGA TGTGGGACCCCAAGGAGACCTGGGCGTTCATCGCCTGGCTCGTGTACTCCGCCTACCTGCACTTCCGGATCACCCACGGG TGGGAGGGGCGCCGTTCCGCCTGGCTGGCCGTGCTGGGCTTCGGCGTCATCCTGTTCACCCTGGTGGGCGTCAACCTGCT GATCGTCGGCCTGCACTCCTACGCCGGCGGCGATCTGTGA
Upstream 100 bases:
>100_bases GGGATCCTCATCGGCGCCCGGGCGTACAAGAACCGGTTTGCGCTGGCGCGGGAGATCAAGCGAATCTTCGGCGCACCCCA GGGGGAGGGGTTGAACTGAC
Downstream 100 bases:
>100_bases CCACCGAACGCAGAACGGGACCCGCCCTTCATGGGGCGGGTCCCCTGCCGTATCAGCGGGGATGCAACACGATCTCCTGC TGCACGACTGACGCCCGTGC
Product: cytochrome C biogenesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGVVLHGLAILARWQGSGFWPTS NMYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIALLAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVA FGAALLYLLRVRGMEIAQARAVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLA LFFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTLLYSVVIGAFLYGFIRRFVTR GRIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIFAMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHG WEGRRSAWLAVLGFGVILFTLVGVNLLIVGLHSYAGGDL
Sequences:
>Translated_439_residues MTPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGVVLHGLAILARWQGSGFWPTS NMYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIALLAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVA FGAALLYLLRVRGMEIAQARAVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLA LFFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTLLYSVVIGAFLYGFIRRFVTR GRIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIFAMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHG WEGRRSAWLAVLGFGVILFTLVGVNLLIVGLHSYAGGDL >Mature_438_residues TPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGVVLHGLAILARWQGSGFWPTSN MYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIALLAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVAF GAALLYLLRVRGMEIAQARAVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLAL FFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTLLYSVVIGAFLYGFIRRFVTRG RIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIFAMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHGW EGRRSAWLAVLGFGVILFTLVGVNLLIVGLHSYAGGDL
Specific function: Required for the biogenesis of c-type cytochromes [H]
COG id: COG0755
COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002541 - InterPro: IPR017562 [H]
Pfam domain/function: PF01578 Cytochrom_C_asm [H]
EC number: NA
Molecular weight: Translated: 48167; Mature: 48036
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHH VLHGLAILARWQGSGFWPTSNMYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIAL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVAFGAALLYLLRVRGMEIAQAR HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH AVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLA HHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTL HHHHHCCHHEEECCCCEEEECCCCCCCCCCCCCCCCCEEECCHHHHEECCCCCCHHHHHH LYSVVIGAFLYGFIRRFVTRGRIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIF HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHEEECCHHHHHHHHHH AMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHGWEGRRSAWLAVLGFGVILFT HHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH LVGVNLLIVGLHSYAGGDL HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPANQFLLDAAQWLLLGAFASYLVAFLLYVSGTLGRRISGGTRFTRTPGHGTVANVIGV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHH VLHGLAILARWQGSGFWPTSNMYEFIGFMAFSSMVAFLVLHGMYRLYVLGALVTPVTIAL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAYSYVFPPEVTPLIPALQSYWLPLHVSLAALGEGFFAVAFGAALLYLLRVRGMEIAQAR HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHH AVSEAAAGMETAAPMAGAAPMAGAAPGVAAESRWERIWGVRLLEIVFYLILVLLGFTVLA HHHHHHHCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFRYAGFQWIFNNGMTTYHLPPIIGPYGAEVGEKGTILGIPLPTVVVPFGWRGKHLNTL HHHHHCCHHEEECCCCEEEECCCCCCCCCCCCCCCCCEEECCHHHHEECCCCCCHHHHHH LYSVVIGAFLYGFIRRFVTRGRIGDALALRVTADPELLDEISYRAVAIGYPIFTLGGLIF HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHEEECCHHHHHHHHHH AMMWAKEAWGRYWMWDPKETWAFIAWLVYSAYLHFRITHGWEGRRSAWLAVLGFGVILFT HHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHH LVGVNLLIVGLHSYAGGDL HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]