Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is resB [H]

Identifier: 51892869

GI number: 51892869

Start: 1880862

End: 1882382

Strand: Reverse

Name: resB [H]

Synonym: STH1731

Alternate gene names: 51892869

Gene position: 1882382-1880862 (Counterclockwise)

Preceding gene: 51892870

Following gene: 51892868

Centisome position: 52.78

GC content: 66.67

Gene sequence:

>1521_bases
GTGTGGCTTGACTGGCAAGGGGGGAGTTTCGCACTGGCCGCAGTACACGCAGCCAACTGTCCGGACTGTCAGCGGCCGCT
GCCGGCGGGGGCACACTTCTGCCCGCACTGCGGACGGGCCTTGGGGGACCGGTCCAGGGCGCGGGTGGAGGGGCCGAACC
CGTGGGTGGTCCTGCTGGACCGGACGTGGGATTTCTTTGCCTCGACCAAGGTCGCCTCATGGATCATCATCGCCCTGGCG
ATCGCGTCGATTGCCGGCACGGTGATCGAACAGGAAGGGATGTACCAGGACTGGCGGCCGCCCGAGCTGTACTACCCTGA
CCGCTACGGGGAGTTCTGGGGCAGCCTCTTCCTCAGGCTCGGCCTGACGCACGCCTACTCCTCGTGGTGGTACGCCGCCC
TGGTCATGATGCTGGTCATCAGCCTGGTCATCTGCTCCCTGCACCGGCTCGTGCCGCTGCACCGGCAGCTGACCCGCCCA
CAGGTGTGGAAGCTGCCCCAGTACCTGCGCAAGCAGCAGGTGGTCCTGGAGGTCCCCGGCGACCTGCAGCAGGCGGAGGA
GAGGCTGAAGCGGGCGGGGTACCGGATCTGGCGGGACCGGGAATGCCTCTACGCCGAGAAGGGCCGGCTGAGCCGCTACG
GGCCGTACATCCTGCACATCGGCCTGCTGGTGGTCTGCTTCGCCGCCTTCGCCAAGGCCCTTCCGGGCTGGGATGAGGTG
CAGGACGTCTGGATTCCGGACGGACAGACGGTGAAGGTTCCGGGGGAGAACTTTGCCATCACGAACCACAAGTTCACGAT
GGAGCTCTACGAGAACGGCATGCCCTCGCGGTATGCCACCGACGCCTCGATCATCGTGGACGGTGAGGAGGTGCTCCGCC
GGACCATCGAGGTGAACAAGCCGCTCAAGTACGGCGGCTGGGAGATCTACCAGGCCTCCTGGCGGGAGGAGCCCGGGGTG
GCGCACCTGCGGCTCGTGGAGGCGGACACCGGGAGTGCGGTGGCCACCGTCGCCTTTGACCTGCGGGATCCGTCGCCGGA
GTACTCGCTGGAGGGCACGGGGCTGAAGCTGGTGGTCCTCACCTACCTGCACGATTTCGTTCTGGACCCCGAGACCAACC
AGCCCACCAACGCCTCCTACGAGGTGCGCAACCCGGTGCTCTTTGCGGAGGTGGCGACCGCGGATGGTTCCGAGATGGTG
GGCCGGATCGCCCTGGCCATGGCCGGGGGGTCCGAGGTGGTGTACACCGGTCCGTACTACCTGGAGCTGGACCGGGTCGA
GAGCCGCTGGTACACGGCCCTGAAGCTGCACCACGACCGGACCGTGCCCTACATGTACTTCGGGCTCGCGGTCGTGTTCG
TGGGCATGGTGATCACCTTCTTCATCTACCACTGGCAGGTCTGGGTCCGTGAGGAGAACGGAGGGATCCTCATCGGCGCC
CGGGCGTACAAGAACCGGTTTGCGCTGGCGCGGGAGATCAAGCGAATCTTCGGCGCACCCCAGGGGGAGGGGTTGAACTG
A

Upstream 100 bases:

>100_bases
GTTCATGGGCATCCTGCTCGCGACCGGCGGGCTGGAGCGCATTTCGGCCTGGCTCCTGGAGATCACGGGGTTTACGGGGT
TCTGACGGCAACCCTGTCTC

Downstream 100 bases:

>100_bases
CATGACACCGGCTAACCAGTTTCTGCTGGATGCCGCCCAGTGGCTGTTGCTCGGCGCCTTTGCGTCCTACCTTGTCGCGT
TCCTGCTGTACGTCTCAGGC

Product: cytochrome C biogenesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLDRTWDFFASTKVASWIIIALA
IASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRLGLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRP
QVWKLPQYLRKQQVVLEVPGDLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV
QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNKPLKYGGWEIYQASWREEPGV
AHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVLTYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMV
GRIALAMAGGSEVVYTGPYYLELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA
RAYKNRFALAREIKRIFGAPQGEGLN

Sequences:

>Translated_506_residues
MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLDRTWDFFASTKVASWIIIALA
IASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRLGLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRP
QVWKLPQYLRKQQVVLEVPGDLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV
QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNKPLKYGGWEIYQASWREEPGV
AHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVLTYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMV
GRIALAMAGGSEVVYTGPYYLELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA
RAYKNRFALAREIKRIFGAPQGEGLN
>Mature_506_residues
MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLDRTWDFFASTKVASWIIIALA
IASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRLGLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRP
QVWKLPQYLRKQQVVLEVPGDLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV
QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNKPLKYGGWEIYQASWREEPGV
AHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVLTYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMV
GRIALAMAGGSEVVYTGPYYLELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA
RAYKNRFALAREIKRIFGAPQGEGLN

Specific function: Required for the biogenesis of c-type cytochromes [H]

COG id: COG1333

COG function: function code O; ResB protein required for cytochrome c biosynthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007816 [H]

Pfam domain/function: PF05140 ResB [H]

EC number: NA

Molecular weight: Translated: 57440; Mature: 57440

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLD
CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCEEEEEE
RTWDFFASTKVASWIIIALAIASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRPQVWKLPQYLRKQQVVLEVPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCC
DLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV
CHHHHHHHHHHCCCCEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNK
CEEECCCCCEEEECCCCEEEECCEEEEEHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCC
PLKYGGWEIYQASWREEPGVAHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVL
CCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEECCCCEEEHHH
TYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMVGRIALAMAGGSEVVYTGPYY
HHHHHHHCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHEEEEEECCCEEEEECCEE
LELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA
EEEECHHCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEE
RAYKNRFALAREIKRIFGAPQGEGLN
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MWLDWQGGSFALAAVHAANCPDCQRPLPAGAHFCPHCGRALGDRSRARVEGPNPWVVLLD
CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCEEEEEE
RTWDFFASTKVASWIIIALAIASIAGTVIEQEGMYQDWRPPELYYPDRYGEFWGSLFLRL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GLTHAYSSWWYAALVMMLVISLVICSLHRLVPLHRQLTRPQVWKLPQYLRKQQVVLEVPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCC
DLQQAEERLKRAGYRIWRDRECLYAEKGRLSRYGPYILHIGLLVVCFAAFAKALPGWDEV
CHHHHHHHHHHCCCCEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
QDVWIPDGQTVKVPGENFAITNHKFTMELYENGMPSRYATDASIIVDGEEVLRRTIEVNK
CEEECCCCCEEEECCCCEEEECCEEEEEHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCC
PLKYGGWEIYQASWREEPGVAHLRLVEADTGSAVATVAFDLRDPSPEYSLEGTGLKLVVL
CCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCEECCCCEEEHHH
TYLHDFVLDPETNQPTNASYEVRNPVLFAEVATADGSEMVGRIALAMAGGSEVVYTGPYY
HHHHHHHCCCCCCCCCCCCEEECCCEEEEEEECCCCHHHHHHEEEEEECCCEEEEECCEE
LELDRVESRWYTALKLHHDRTVPYMYFGLAVVFVGMVITFFIYHWQVWVREENGGILIGA
EEEECHHCHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEE
RAYKNRFALAREIKRIFGAPQGEGLN
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715 [H]