| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892866
Identifier: 51892866
GI number: 51892866
Start: 1877728
End: 1878615
Strand: Reverse
Name: 51892866
Synonym: STH1728
Alternate gene names: NA
Gene position: 1878615-1877728 (Counterclockwise)
Preceding gene: 51892868
Following gene: 51892865
Centisome position: 52.68
GC content: 71.06
Gene sequence:
>888_bases GTGGGGCTGCCCTTCCCTGTTGGCGAGGGTGGCGTACAGGAGGAGGATTCAGGCATGACGGTTCACGGCGACCTGGAACG CGCCATCGCCATGGCGCAGGCAGCCAGGGGCAACTACCTGTTGTTCGCCACACAGTCGGAGGACGAGAAGGCGCACCAGG TCTTCAAGCAGATGGCGGAGGACATGGAGCGGCACGTGATGATCCTGGAGTCACGGCTGCAGTACCTGGAGCAGTACAAC GCGCTCGTGCAGCATTCCCGCGGCCAGCAGCAGGGGCAGGACCAGGGCAGCGGCCAGGGGCAGCGAAAGGCCCAGGGTCA GGGGCAGACCCACGGACAGGGGCCGGGGCTGCACCAGGCTCAGGGCGCCAACCAGCCCCCGGGGCAGGGTTCCGGGCAAG GGCAGGGCCAGGGAGCGGATCAGCGGGAGGGTCCGCAGGGCATGGGCTGGCAGTTCCCGCGGATGGATGGGCAGGGCGGC GGCCAGCAGGCCCAGGGGCAACGGCAGGACGGCCAGCAGCAGGCCCAACAGGACGTCCCCCAGCAGCAGGTCGGCGGACA CGGCGGCGCCCCGCACGGACAGGGCGGCCCGTGGCAAGGGGGCACCGGTCAGAGTGGAACCGGCCAGGGCCGCTGGGTGC AGCAGGCACAGGGAGGCGGAGAGAATCCCGCCGGCGACGGGCAGGCGGGTGGGTCCGGGCAATTCAGCCAGGCCGGGCAA CCCGACCCGTCGGCGGGTGCTGGCACCGACCAGCAGATGGCGAGCCAGTGCGGACAGCCGCAGAGCGACAGACAGCAGGG GCAACAGCAGTCGGGCCAGGACGGACAGCCCTGGCAACAGCAGGGACAGCCATCGCAGGGTGCTGAGCCCTGGCAGCAGC AGGCCTAG
Upstream 100 bases:
>100_bases CCGCCCGCACGATCATCGTCGCATACCTCGCTTTCGTTATGCAAAGACTAGCGCCGGAGCGCGGCCGCCGCCAGGCGGCA GGCATAGGTGGATTTCGGCG
Downstream 100 bases:
>100_bases GGTGAAGGCGCCCTGCGGGCCGGGGCGCGGCGGCGGGAGGAGGCGGGGGGCAGGCCGGCGAACTGTAACGCTCGTGGCGC GGGCCATCATGGCGCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MGLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAEDMERHVMILESRLQYLEQYN ALVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQAQGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGG GQQAQGQRQDGQQQAQQDVPQQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQ PDPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA
Sequences:
>Translated_295_residues MGLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAEDMERHVMILESRLQYLEQYN ALVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQAQGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGG GQQAQGQRQDGQQQAQQDVPQQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQ PDPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA >Mature_294_residues GLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAEDMERHVMILESRLQYLEQYNA LVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQAQGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGGG QQAQGQRQDGQQQAQQDVPQQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQP DPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30871; Mature: 30740
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAE CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH DMERHVMILESRLQYLEQYNALVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHH QGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGGGQQAQGQRQDGQQQAQQDVP CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC QQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQ HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PDPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHCC >Mature Secondary Structure GLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAE CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH DMERHVMILESRLQYLEQYNALVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHH QGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGGGQQAQGQRQDGQQQAQQDVP CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC QQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQ HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC PDPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA