Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892866

Identifier: 51892866

GI number: 51892866

Start: 1877728

End: 1878615

Strand: Reverse

Name: 51892866

Synonym: STH1728

Alternate gene names: NA

Gene position: 1878615-1877728 (Counterclockwise)

Preceding gene: 51892868

Following gene: 51892865

Centisome position: 52.68

GC content: 71.06

Gene sequence:

>888_bases
GTGGGGCTGCCCTTCCCTGTTGGCGAGGGTGGCGTACAGGAGGAGGATTCAGGCATGACGGTTCACGGCGACCTGGAACG
CGCCATCGCCATGGCGCAGGCAGCCAGGGGCAACTACCTGTTGTTCGCCACACAGTCGGAGGACGAGAAGGCGCACCAGG
TCTTCAAGCAGATGGCGGAGGACATGGAGCGGCACGTGATGATCCTGGAGTCACGGCTGCAGTACCTGGAGCAGTACAAC
GCGCTCGTGCAGCATTCCCGCGGCCAGCAGCAGGGGCAGGACCAGGGCAGCGGCCAGGGGCAGCGAAAGGCCCAGGGTCA
GGGGCAGACCCACGGACAGGGGCCGGGGCTGCACCAGGCTCAGGGCGCCAACCAGCCCCCGGGGCAGGGTTCCGGGCAAG
GGCAGGGCCAGGGAGCGGATCAGCGGGAGGGTCCGCAGGGCATGGGCTGGCAGTTCCCGCGGATGGATGGGCAGGGCGGC
GGCCAGCAGGCCCAGGGGCAACGGCAGGACGGCCAGCAGCAGGCCCAACAGGACGTCCCCCAGCAGCAGGTCGGCGGACA
CGGCGGCGCCCCGCACGGACAGGGCGGCCCGTGGCAAGGGGGCACCGGTCAGAGTGGAACCGGCCAGGGCCGCTGGGTGC
AGCAGGCACAGGGAGGCGGAGAGAATCCCGCCGGCGACGGGCAGGCGGGTGGGTCCGGGCAATTCAGCCAGGCCGGGCAA
CCCGACCCGTCGGCGGGTGCTGGCACCGACCAGCAGATGGCGAGCCAGTGCGGACAGCCGCAGAGCGACAGACAGCAGGG
GCAACAGCAGTCGGGCCAGGACGGACAGCCCTGGCAACAGCAGGGACAGCCATCGCAGGGTGCTGAGCCCTGGCAGCAGC
AGGCCTAG

Upstream 100 bases:

>100_bases
CCGCCCGCACGATCATCGTCGCATACCTCGCTTTCGTTATGCAAAGACTAGCGCCGGAGCGCGGCCGCCGCCAGGCGGCA
GGCATAGGTGGATTTCGGCG

Downstream 100 bases:

>100_bases
GGTGAAGGCGCCCTGCGGGCCGGGGCGCGGCGGCGGGAGGAGGCGGGGGGCAGGCCGGCGAACTGTAACGCTCGTGGCGC
GGGCCATCATGGCGCCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MGLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAEDMERHVMILESRLQYLEQYN
ALVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQAQGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGG
GQQAQGQRQDGQQQAQQDVPQQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQ
PDPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA

Sequences:

>Translated_295_residues
MGLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAEDMERHVMILESRLQYLEQYN
ALVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQAQGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGG
GQQAQGQRQDGQQQAQQDVPQQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQ
PDPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA
>Mature_294_residues
GLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAEDMERHVMILESRLQYLEQYNA
LVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQAQGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGGG
QQAQGQRQDGQQQAQQDVPQQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQP
DPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30871; Mature: 30740

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAE
CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
DMERHVMILESRLQYLEQYNALVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHH
QGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGGGQQAQGQRQDGQQQAQQDVP
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
QQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA
CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHCC
>Mature Secondary Structure 
GLPFPVGEGGVQEEDSGMTVHGDLERAIAMAQAARGNYLLFATQSEDEKAHQVFKQMAE
CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
DMERHVMILESRLQYLEQYNALVQHSRGQQQGQDQGSGQGQRKAQGQGQTHGQGPGLHQA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHH
QGANQPPGQGSGQGQGQGADQREGPQGMGWQFPRMDGQGGGQQAQGQRQDGQQQAQQDVP
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
QQQVGGHGGAPHGQGGPWQGGTGQSGTGQGRWVQQAQGGGENPAGDGQAGGSGQFSQAGQ
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDPSAGAGTDQQMASQCGQPQSDRQQGQQQSGQDGQPWQQQGQPSQGAEPWQQQA
CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA