| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is punA [H]
Identifier: 51891974
GI number: 51891974
Start: 942692
End: 943513
Strand: Reverse
Name: punA [H]
Synonym: STH836
Alternate gene names: 51891974
Gene position: 943513-942692 (Counterclockwise)
Preceding gene: 51891980
Following gene: 51891972
Centisome position: 26.46
GC content: 70.07
Gene sequence:
>822_bases ATGTCCGACCTGTTGCAGCGCATCGAGGAAGCCCGCGCGGCCGTGGCCGCCAGGGGCGGCGTCACGCCGCAAGTCGGGCT TATCCTGGGTTCCGGCCTCGGCGACCTGGCCGACCAGGTGGAGGACGCCGTGAAGGTCCCGTACAACGAGATTCCCCACT TCCCCGTTTCCACCGCGCCCGGCCACGCAGGCCGGCTGGTGATCGGCCGCCTGGAAGGAAAGCCGGTGGTCGCCATGCAG GGGCGCGTCCACTTCTACGAGGGCTATACCATGGAGCAGGTCACCTTCCCGGTGCGCGTCATGCGTGCCCTGGGCGTCGA GACCCTGATCGTGACCTGCGCCGCGGGCGGGCTCAACCCGTCGTTCTCCGCCGGCGACCTCATGCTGATCACCGACCACA TCAACTTCATGGGGCAGGACCCGCTGCGGGGCCCCAACGACGAGCGGCTCGGCCCGCGCTTCCCGGCCACCGTCGGCGCC TACACGCCGGAGCTGCGTGAGCTGGCCGTTGCGGTGGCGCAGGAGATGGGCGTCTCTCTGCGGCAGGGAACGTACACGGC CATCTCAGGGCCTTGCTACAACACCAGCGCGGAGCTCCGGATGCTCCAGCGGTTGGGCGGCGACGCCGTCGGCATGTCCA CGGTGCCGGAGGTCGTGACGGCCCGGCACATGGGGCTGCGGGTGCTCGGCATCGCCTGCATCACGGACATGGCGCTGCCC GACGCGCCGGTGCACCTGACCCACGAGCAGGTGCTGGAAGTCGCCAACCGCACGAAGCCCCTGTTCCAGAACCTGGTGCG CGGCGTGGTGCGGCGGATCTGA
Upstream 100 bases:
>100_bases TTAGGTTTGTCTACAGAAGTTGCGTGTCCCGTGCGCTGGCCGTCCGCGGGCGCATCAGCCGCCTGCCGGCCAGACACCCT ACCAAGCGAGGTGTTGACCT
Downstream 100 bases:
>100_bases CGGCCCGGCGGGCGGAGGGCCCGCGCGCAGCCCGGCCACGGGCGAGGCGCCGATCACAGGAGGGCGGCCTGCAGGACACA CCGGCCGTGTGCCTGCAGGC
Product: purine nucleoside phosphorylase
Products: NA
Alternate protein names: Inosine phosphorylase; Purine nucleoside phosphorylase I; PNP I; PU-NPase I [H]
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MSDLLQRIEEARAAVAARGGVTPQVGLILGSGLGDLADQVEDAVKVPYNEIPHFPVSTAPGHAGRLVIGRLEGKPVVAMQ GRVHFYEGYTMEQVTFPVRVMRALGVETLIVTCAAGGLNPSFSAGDLMLITDHINFMGQDPLRGPNDERLGPRFPATVGA YTPELRELAVAVAQEMGVSLRQGTYTAISGPCYNTSAELRMLQRLGGDAVGMSTVPEVVTARHMGLRVLGIACITDMALP DAPVHLTHEQVLEVANRTKPLFQNLVRGVVRRI
Sequences:
>Translated_273_residues MSDLLQRIEEARAAVAARGGVTPQVGLILGSGLGDLADQVEDAVKVPYNEIPHFPVSTAPGHAGRLVIGRLEGKPVVAMQ GRVHFYEGYTMEQVTFPVRVMRALGVETLIVTCAAGGLNPSFSAGDLMLITDHINFMGQDPLRGPNDERLGPRFPATVGA YTPELRELAVAVAQEMGVSLRQGTYTAISGPCYNTSAELRMLQRLGGDAVGMSTVPEVVTARHMGLRVLGIACITDMALP DAPVHLTHEQVLEVANRTKPLFQNLVRGVVRRI >Mature_272_residues SDLLQRIEEARAAVAARGGVTPQVGLILGSGLGDLADQVEDAVKVPYNEIPHFPVSTAPGHAGRLVIGRLEGKPVVAMQG RVHFYEGYTMEQVTFPVRVMRALGVETLIVTCAAGGLNPSFSAGDLMLITDHINFMGQDPLRGPNDERLGPRFPATVGAY TPELRELAVAVAQEMGVSLRQGTYTAISGPCYNTSAELRMLQRLGGDAVGMSTVPEVVTARHMGLRVLGIACITDMALPD APVHLTHEQVLEVANRTKPLFQNLVRGVVRRI
Specific function: Cleavage of guanosine or inosine to respective bases and sugar-1-phosphate molecules [H]
COG id: COG0005
COG function: function code F; Purine nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/MTAP phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI157168362, Length=251, Percent_Identity=54.1832669322709, Blast_Score=267, Evalue=7e-72, Organism=Homo sapiens, GI47132622, Length=252, Percent_Identity=26.984126984127, Blast_Score=75, Evalue=5e-14, Organism=Escherichia coli, GI1788746, Length=252, Percent_Identity=49.6031746031746, Blast_Score=245, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17541190, Length=256, Percent_Identity=42.1875, Blast_Score=204, Evalue=5e-53, Organism=Caenorhabditis elegans, GI71980569, Length=250, Percent_Identity=26.8, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323238, Length=308, Percent_Identity=43.1818181818182, Blast_Score=220, Evalue=1e-58, Organism=Drosophila melanogaster, GI45552887, Length=275, Percent_Identity=46.9090909090909, Blast_Score=255, Evalue=2e-68, Organism=Drosophila melanogaster, GI24656093, Length=275, Percent_Identity=46.9090909090909, Blast_Score=255, Evalue=2e-68, Organism=Drosophila melanogaster, GI24656090, Length=275, Percent_Identity=46.9090909090909, Blast_Score=255, Evalue=2e-68, Organism=Drosophila melanogaster, GI45552885, Length=275, Percent_Identity=46.9090909090909, Blast_Score=255, Evalue=3e-68, Organism=Drosophila melanogaster, GI24762376, Length=239, Percent_Identity=38.0753138075314, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI20130079, Length=228, Percent_Identity=28.5087719298246, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011268 - InterPro: IPR000845 - InterPro: IPR011270 - InterPro: IPR001369 - InterPro: IPR018099 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.1 [H]
Molecular weight: Translated: 29255; Mature: 29124
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLLQRIEEARAAVAARGGVTPQVGLILGSGLGDLADQVEDAVKVPYNEIPHFPVSTAP CHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCHHHHHHHHHHHHHCCHHHCCCCCCCCCC GHAGRLVIGRLEGKPVVAMQGRVHFYEGYTMEQVTFPVRVMRALGVETLIVTCAAGGLNP CCCCEEEEEECCCCEEEEEECEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC SFSAGDLMLITDHINFMGQDPLRGPNDERLGPRFPATVGAYTPELRELAVAVAQEMGVSL CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHH RQGTYTAISGPCYNTSAELRMLQRLGGDAVGMSTVPEVVTARHMGLRVLGIACITDMALP HCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAPVHLTHEQVLEVANRTKPLFQNLVRGVVRRI CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDLLQRIEEARAAVAARGGVTPQVGLILGSGLGDLADQVEDAVKVPYNEIPHFPVSTAP HHHHHHHHHHHHHHHHCCCCCCCHHHEEECCHHHHHHHHHHHHHCCHHHCCCCCCCCCC GHAGRLVIGRLEGKPVVAMQGRVHFYEGYTMEQVTFPVRVMRALGVETLIVTCAAGGLNP CCCCEEEEEECCCCEEEEEECEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC SFSAGDLMLITDHINFMGQDPLRGPNDERLGPRFPATVGAYTPELRELAVAVAQEMGVSL CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCHH RQGTYTAISGPCYNTSAELRMLQRLGGDAVGMSTVPEVVTARHMGLRVLGIACITDMALP HCCCEEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DAPVHLTHEQVLEVANRTKPLFQNLVRGVVRRI CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9058965 [H]