Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51891980

Identifier: 51891980

GI number: 51891980

Start: 952547

End: 952897

Strand: Reverse

Name: 51891980

Synonym: STH842

Alternate gene names: NA

Gene position: 952897-952547 (Counterclockwise)

Preceding gene: 51891981

Following gene: 51891974

Centisome position: 26.72

GC content: 68.95

Gene sequence:

>351_bases
ATGGCCGATGACCTGGAGGCGCTGCTTCTGCATGCGTTCATCGACCTGATCGAAGAGCGGAAGGCGGCCGGCCGCCGGGA
GCTGGTGGCCACCCACGAGACCATCGCCCAGTGGCTTTCGGACCGGACGGGCCTCAACGTGACGCCGCGCCACGTGCAGT
ACCTGACGCTCGCGCTCAGGGACGGGCAGATCATCGACATTGGGGGCGGCGGCATCGGCAGGCCCAACACGTACGACACC
CGGGAGGCGCAGATGGGAACCGACGCCTTCTGGGACCAGGTGGAGGCGTTCCTGATGGTCTGGCGCATGCCGGGCCGCGA
AGCGCTGCGCAAGGCTGACCCCGGCGCCTGA

Upstream 100 bases:

>100_bases
GGGGACCTGCAGCTGGAGAGCCAACCGGGCCGGGGGTCGCGCTTCATCGTGAGCTTCCCGGCTTTGAAGGACGAATCGTG
AGACGGGGAGGGCGCGACCG

Downstream 100 bases:

>100_bases
AGGCGCCGGGGTATTCTGTTGGGCGACGCGGAATTGCCGTCTCATGCGATGCGAGCGGCATGGACCGGGACGTGCCCCGG
TGGGTGAACTGGAAGTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALRDGQIIDIGGGGIGRPNTYDT
REAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA

Sequences:

>Translated_116_residues
MADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALRDGQIIDIGGGGIGRPNTYDT
REAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA
>Mature_115_residues
ADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALRDGQIIDIGGGGIGRPNTYDTR
EAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12974; Mature: 12843

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALR
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEC
DGQIIDIGGGGIGRPNTYDTREAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA
CCEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
>Mature Secondary Structure 
ADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALR
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEC
DGQIIDIGGGGIGRPNTYDTREAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA
CCEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA