| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51891980
Identifier: 51891980
GI number: 51891980
Start: 952547
End: 952897
Strand: Reverse
Name: 51891980
Synonym: STH842
Alternate gene names: NA
Gene position: 952897-952547 (Counterclockwise)
Preceding gene: 51891981
Following gene: 51891974
Centisome position: 26.72
GC content: 68.95
Gene sequence:
>351_bases ATGGCCGATGACCTGGAGGCGCTGCTTCTGCATGCGTTCATCGACCTGATCGAAGAGCGGAAGGCGGCCGGCCGCCGGGA GCTGGTGGCCACCCACGAGACCATCGCCCAGTGGCTTTCGGACCGGACGGGCCTCAACGTGACGCCGCGCCACGTGCAGT ACCTGACGCTCGCGCTCAGGGACGGGCAGATCATCGACATTGGGGGCGGCGGCATCGGCAGGCCCAACACGTACGACACC CGGGAGGCGCAGATGGGAACCGACGCCTTCTGGGACCAGGTGGAGGCGTTCCTGATGGTCTGGCGCATGCCGGGCCGCGA AGCGCTGCGCAAGGCTGACCCCGGCGCCTGA
Upstream 100 bases:
>100_bases GGGGACCTGCAGCTGGAGAGCCAACCGGGCCGGGGGTCGCGCTTCATCGTGAGCTTCCCGGCTTTGAAGGACGAATCGTG AGACGGGGAGGGCGCGACCG
Downstream 100 bases:
>100_bases AGGCGCCGGGGTATTCTGTTGGGCGACGCGGAATTGCCGTCTCATGCGATGCGAGCGGCATGGACCGGGACGTGCCCCGG TGGGTGAACTGGAAGTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALRDGQIIDIGGGGIGRPNTYDT REAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA
Sequences:
>Translated_116_residues MADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALRDGQIIDIGGGGIGRPNTYDT REAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA >Mature_115_residues ADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALRDGQIIDIGGGGIGRPNTYDTR EAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12974; Mature: 12843
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALR CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEC DGQIIDIGGGGIGRPNTYDTREAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA CCEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCC >Mature Secondary Structure ADDLEALLLHAFIDLIEERKAAGRRELVATHETIAQWLSDRTGLNVTPRHVQYLTLALR CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEC DGQIIDIGGGGIGRPNTYDTREAQMGTDAFWDQVEAFLMVWRMPGREALRKADPGA CCEEEEECCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA