| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598665
Identifier: 51598665
GI number: 51598665
Start: 422179
End: 422808
Strand: Direct
Name: 51598665
Synonym: BG0411
Alternate gene names: NA
Gene position: 422179-422808 (Clockwise)
Preceding gene: 51598662
Following gene: 51598666
Centisome position: 46.69
GC content: 27.46
Gene sequence:
>630_bases ATGAAAAAAAATCCAAACATTTATATTTCCTTAACATTGCTCATCATTTCCACTTTAAATGCACTTGCAAATGAAGAAGA CAATACCAATGAAAAAAATAATCAATCCAAACAAAGCTCCAATTTCTTTAATCCAGAAAGAGGATTCACATATTCAACAG GGATTGGAATTGGAATTGGATTTTTCCTAAATTCAAATACTAAACATCTTATTTTTAGACCTTACTACACATTCTCTATT AATACTTTTGATTTTTTAATCGTTGCTATGATATTAACAAGGGAAACCCTTAATATCCCTAAAGAAATGCAATACTTTAA ATCCTATATTGGAGGAGGAATAAACTGGCACATTGCAAACTTAATTAAAAAAACAAAATATTTTTGCTCTACTATTGGCA TAGGTGGTCGTTTTTACTTATCTACAAACTTTATAGGAGACATTCAATTTTATGAAAAATTGCCTTATGTGCTAGAGCCT TATATGTTTATTGAAATTTCTACTAAAAAGGCAATCCCTTTAATGGGATTAGACTTTAAAATTGATTTTTTATTTTTAGA TACATTTAACATTTCTTTTAATTTCACTATTAGATATAATCTTAAGGACGAAAAAGAGATGGAAACATGA
Upstream 100 bases:
>100_bases TATAAAAAATATTTTTTATTAAACAGGAAAATTACCACTGAATACATGTATAATATTGAAAAGACAAATCAATTTTTATA TTATTTAAAATAATCTGTTT
Downstream 100 bases:
>100_bases AAAAAAGATCAAAATTTTTTCTTTACTGCTATATTTTATGTCTAGCAGGATTTTTATTTTTTTCCTTAAATCCAAAAGTC CTAAAACAAATTAAACACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKKNPNIYISLTLLIISTLNALANEEDNTNEKNNQSKQSSNFFNPERGFTYSTGIGIGIGFFLNSNTKHLIFRPYYTFSI NTFDFLIVAMILTRETLNIPKEMQYFKSYIGGGINWHIANLIKKTKYFCSTIGIGGRFYLSTNFIGDIQFYEKLPYVLEP YMFIEISTKKAIPLMGLDFKIDFLFLDTFNISFNFTIRYNLKDEKEMET
Sequences:
>Translated_209_residues MKKNPNIYISLTLLIISTLNALANEEDNTNEKNNQSKQSSNFFNPERGFTYSTGIGIGIGFFLNSNTKHLIFRPYYTFSI NTFDFLIVAMILTRETLNIPKEMQYFKSYIGGGINWHIANLIKKTKYFCSTIGIGGRFYLSTNFIGDIQFYEKLPYVLEP YMFIEISTKKAIPLMGLDFKIDFLFLDTFNISFNFTIRYNLKDEKEMET >Mature_209_residues MKKNPNIYISLTLLIISTLNALANEEDNTNEKNNQSKQSSNFFNPERGFTYSTGIGIGIGFFLNSNTKHLIFRPYYTFSI NTFDFLIVAMILTRETLNIPKEMQYFKSYIGGGINWHIANLIKKTKYFCSTIGIGGRFYLSTNFIGDIQFYEKLPYVLEP YMFIEISTKKAIPLMGLDFKIDFLFLDTFNISFNFTIRYNLKDEKEMET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24317; Mature: 24317
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNPNIYISLTLLIISTLNALANEEDNTNEKNNQSKQSSNFFNPERGFTYSTGIGIGIG CCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCEEEE FFLNSNTKHLIFRPYYTFSINTFDFLIVAMILTRETLNIPKEMQYFKSYIGGGINWHIAN EEECCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHH LIKKTKYFCSTIGIGGRFYLSTNFIGDIQFYEKLPYVLEPYMFIEISTKKAIPLMGLDFK HHHHHHHHHHHCCCCEEEEEEECEEECCHHHHHCCHHHCCEEEEEEECCCCCEEECCCEE IDFLFLDTFNISFNFTIRYNLKDEKEMET EEEEEEEEEEEEEEEEEEECCCCHHCCCC >Mature Secondary Structure MKKNPNIYISLTLLIISTLNALANEEDNTNEKNNQSKQSSNFFNPERGFTYSTGIGIGIG CCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCEEEE FFLNSNTKHLIFRPYYTFSINTFDFLIVAMILTRETLNIPKEMQYFKSYIGGGINWHIAN EEECCCCCEEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEHHHH LIKKTKYFCSTIGIGGRFYLSTNFIGDIQFYEKLPYVLEPYMFIEISTKKAIPLMGLDFK HHHHHHHHHHHCCCCEEEEEEECEEECCHHHHHCCHHHCCEEEEEEECCCCCEEECCCEE IDFLFLDTFNISFNFTIRYNLKDEKEMET EEEEEEEEEEEEEEEEEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA