| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598662
Identifier: 51598662
GI number: 51598662
Start: 418356
End: 418967
Strand: Direct
Name: 51598662
Synonym: BG0408
Alternate gene names: NA
Gene position: 418356-418967 (Clockwise)
Preceding gene: 51598661
Following gene: 51598665
Centisome position: 46.27
GC content: 30.56
Gene sequence:
>612_bases ATGATAAAAAATTTTAAAAAAATGCATATTTTAATATTAGTATTAGGTGTAGCACACCTTTCTTTTGCATCTGACAATTA TATGGTCAGATGCAGCAAGGAAGAAGATTCAACCACCTGTATCGCAAAGCTTAAAGGCATAAAAGAAAAAAAAAGTTATG ACTTATTTTCAATGGGTATTGGAATAGGTAATCCTATTGCAAACATCATAATTACAATTCCTTATGTAAATATTGATTTT GGATATGGGGGTTTTATTGGCCCTAAGTCAAATAATTTTGAAAATTATCTAAACGGCGGAATAGATATTATTTTTAAAAA ACAAATTGGACAATACATGAGAATCGGTGGCGGTATTGGAATAGGTGCAGATTGGTCAAAAACATCCCTTATGCCTCCTG ACGAAGAGGAAGAGACTGATTATGAGAGAATAGGCGCTGTTATAAGAATTCCTTTTGTAATGGAATATAACTTTGCAAAA AATTTATACATAGGATTCAAAGTTTACCCTGCACTAGGGCCAACAATATTGCTAACAAAGCCAAACATTTTATTTGAAGG AATTAAATTCAATTTTTTTGGATTTGGATTCATAAAATTTGCATTTAATTAA
Upstream 100 bases:
>100_bases GGAACAACTATGCTGCTTGGCGGCCCAATGTCATTTGAAGGAGCTAGATTTAATTTCTTGGGTACAGGCTTTATCAAAAT ATATATATAGTGGAGAATAA
Downstream 100 bases:
>100_bases CCAAATAATTAAATTGGTGATTAAAATTAAGCTTACTTAAGCAAGCTTAATTTTAATTAAAACCAGCAATAAAAGCTTGA CCATTCCCATCAATAAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MIKNFKKMHILILVLGVAHLSFASDNYMVRCSKEEDSTTCIAKLKGIKEKKSYDLFSMGIGIGNPIANIIITIPYVNIDF GYGGFIGPKSNNFENYLNGGIDIIFKKQIGQYMRIGGGIGIGADWSKTSLMPPDEEEETDYERIGAVIRIPFVMEYNFAK NLYIGFKVYPALGPTILLTKPNILFEGIKFNFFGFGFIKFAFN
Sequences:
>Translated_203_residues MIKNFKKMHILILVLGVAHLSFASDNYMVRCSKEEDSTTCIAKLKGIKEKKSYDLFSMGIGIGNPIANIIITIPYVNIDF GYGGFIGPKSNNFENYLNGGIDIIFKKQIGQYMRIGGGIGIGADWSKTSLMPPDEEEETDYERIGAVIRIPFVMEYNFAK NLYIGFKVYPALGPTILLTKPNILFEGIKFNFFGFGFIKFAFN >Mature_203_residues MIKNFKKMHILILVLGVAHLSFASDNYMVRCSKEEDSTTCIAKLKGIKEKKSYDLFSMGIGIGNPIANIIITIPYVNIDF GYGGFIGPKSNNFENYLNGGIDIIFKKQIGQYMRIGGGIGIGADWSKTSLMPPDEEEETDYERIGAVIRIPFVMEYNFAK NLYIGFKVYPALGPTILLTKPNILFEGIKFNFFGFGFIKFAFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22775; Mature: 22775
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNFKKMHILILVLGVAHLSFASDNYMVRCSKEEDSTTCIAKLKGIKEKKSYDLFSMGI CCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECC GIGNPIANIIITIPYVNIDFGYGGFIGPKSNNFENYLNGGIDIIFKKQIGQYMRIGGGIG CCCCCCEEEEEEEEEEEEECCCCCEECCCCCCHHHHHCCCEEEEEHHHCCHHHCCCCCCC IGADWSKTSLMPPDEEEETDYERIGAVIRIPFVMEYNFAKNLYIGFKVYPALGPTILLTK CCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEC PNILFEGIKFNFFGFGFIKFAFN CCEEEECEEEEEEEEEEEEEEEC >Mature Secondary Structure MIKNFKKMHILILVLGVAHLSFASDNYMVRCSKEEDSTTCIAKLKGIKEKKSYDLFSMGI CCCCHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECC GIGNPIANIIITIPYVNIDFGYGGFIGPKSNNFENYLNGGIDIIFKKQIGQYMRIGGGIG CCCCCCEEEEEEEEEEEEECCCCCEECCCCCCHHHHHCCCEEEEEHHHCCHHHCCCCCCC IGADWSKTSLMPPDEEEETDYERIGAVIRIPFVMEYNFAKNLYIGFKVYPALGPTILLTK CCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEC PNILFEGIKFNFFGFGFIKFAFN CCEEEECEEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA