| Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
|---|---|
| Accession | NC_006156 |
| Length | 904,246 |
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The map label for this gene is 51598453
Identifier: 51598453
GI number: 51598453
Start: 190318
End: 191058
Strand: Direct
Name: 51598453
Synonym: BG0191
Alternate gene names: NA
Gene position: 190318-191058 (Clockwise)
Preceding gene: 51598445
Following gene: 51598456
Centisome position: 21.05
GC content: 21.46
Gene sequence:
>741_bases ATGTCTAGCCCAAAAATACTTACCATAATAGTGCTCTTGGCAATTTTAGCACAAGGATGCAAAGAACCTTCCATTATTGA AAAACAATTTAATTATACAATAGTTTTTTCAGATGCAACCGAATATTTTTTTCAAATTCAAAAAACTCCATTCATAAAAA ACAAAATACTATTTATAAATGACAAAAGTTTAGAAATTATAAAAGATAAGCTTAAAACAATAAAAAAAATACTATTAACC CATAAATCCAATAATGAAATATTAAATAACGAAATTTTAAAAGAGAAAATTTTTAATCTATCAAAAATAAAATTTTCTCT AAAAAAGTCTATTGATTTTCTGCTTAACGGAAAATCAATAGACTTCCAAAAAACATTATTATTTAGAGATAAATCTCTAA ATAACGAAGACCTTGAATACTTAGAAAAAAAAGGTAAAGAAAAAAACGTTAATATTACCCTAATAAACGAGAAAAACATA TCCTATATAAAAACATTTATTACTCCCCAAATAAAAACAATAATATTATTTTCTTTTAGAGATAATAATATTATTTTAAA AAAGATATCAAATTCGCCTTTTTTCAAAAATATACAATTTGTATTAATTGGCAATACAAGAAAAGACTTAAAAATTATTA AGTTAAAATATGTAATCACTCTTAAAGAATCTGATTTGATGGAAATAGTAAAAGACATTGAAACAGATTTTCAATATGAA TTTAACATCTATAAACAATAA
Upstream 100 bases:
>100_bases ACATTAATTCTAACCAATATAAGTATATATGCGTTAATAATGCTTGTTGCATTAGTTTTAATATTTATAGCAACTAACAA TAAGTATGCTAGGAAATAAA
Downstream 100 bases:
>100_bases AAATGATTAAATTTGCAAATAATAATAAAACAAATAATTATAAATAAACAATTTAATGCAACAATAAAAGATCTTTAAAG CTGTTGTATGTGGCAATAGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MSSPKILTIIVLLAILAQGCKEPSIIEKQFNYTIVFSDATEYFFQIQKTPFIKNKILFINDKSLEIIKDKLKTIKKILLT HKSNNEILNNEILKEKIFNLSKIKFSLKKSIDFLLNGKSIDFQKTLLFRDKSLNNEDLEYLEKKGKEKNVNITLINEKNI SYIKTFITPQIKTIILFSFRDNNIILKKISNSPFFKNIQFVLIGNTRKDLKIIKLKYVITLKESDLMEIVKDIETDFQYE FNIYKQ
Sequences:
>Translated_246_residues MSSPKILTIIVLLAILAQGCKEPSIIEKQFNYTIVFSDATEYFFQIQKTPFIKNKILFINDKSLEIIKDKLKTIKKILLT HKSNNEILNNEILKEKIFNLSKIKFSLKKSIDFLLNGKSIDFQKTLLFRDKSLNNEDLEYLEKKGKEKNVNITLINEKNI SYIKTFITPQIKTIILFSFRDNNIILKKISNSPFFKNIQFVLIGNTRKDLKIIKLKYVITLKESDLMEIVKDIETDFQYE FNIYKQ >Mature_245_residues SSPKILTIIVLLAILAQGCKEPSIIEKQFNYTIVFSDATEYFFQIQKTPFIKNKILFINDKSLEIIKDKLKTIKKILLTH KSNNEILNNEILKEKIFNLSKIKFSLKKSIDFLLNGKSIDFQKTLLFRDKSLNNEDLEYLEKKGKEKNVNITLINEKNIS YIKTFITPQIKTIILFSFRDNNIILKKISNSPFFKNIQFVLIGNTRKDLKIIKLKYVITLKESDLMEIVKDIETDFQYEF NIYKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28949; Mature: 28817
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPKILTIIVLLAILAQGCKEPSIIEKQFNYTIVFSDATEYFFQIQKTPFIKNKILFIN CCCCHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEECCHHEEEEEECCCCCCCEEEEEE DKSLEIIKDKLKTIKKILLTHKSNNEILNNEILKEKIFNLSKIKFSLKKSIDFLLNGKSI CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCC DFQKTLLFRDKSLNNEDLEYLEKKGKEKNVNITLINEKNISYIKTFITPQIKTIILFSFR CHHHEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCEEEEEEEEEE DNNIILKKISNSPFFKNIQFVLIGNTRKDLKIIKLKYVITLKESDLMEIVKDIETDFQYE CCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCHHHHHHHHHCCCEEEE FNIYKQ EEEECC >Mature Secondary Structure SSPKILTIIVLLAILAQGCKEPSIIEKQFNYTIVFSDATEYFFQIQKTPFIKNKILFIN CCCHHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEECCHHEEEEEECCCCCCCEEEEEE DKSLEIIKDKLKTIKKILLTHKSNNEILNNEILKEKIFNLSKIKFSLKKSIDFLLNGKSI CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCCCC DFQKTLLFRDKSLNNEDLEYLEKKGKEKNVNITLINEKNISYIKTFITPQIKTIILFSFR CHHHEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCCEEEEEEEEEE DNNIILKKISNSPFFKNIQFVLIGNTRKDLKIIKLKYVITLKESDLMEIVKDIETDFQYE CCCEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEEEEEECCCHHHHHHHHHCCCEEEE FNIYKQ EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA