Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

Click here to switch to the map view.

The map label for this gene is 51596138

Identifier: 51596138

GI number: 51596138

Start: 2150978

End: 2151787

Strand: Direct

Name: 51596138

Synonym: YPTB1803

Alternate gene names: NA

Gene position: 2150978-2151787 (Clockwise)

Preceding gene: 51596137

Following gene: 51596139

Centisome position: 45.33

GC content: 49.63

Gene sequence:

>810_bases
ATGACCACTGCAATTGAACAACTTATTAAAATGCACGATCCGCGCTGCGTCAGCATTGAATCGCTGAATATTGGCCGGGG
TCGTGCCGTTCTGACCAAAGACCAGATATTAGGGACTTTCGCCACCTGCCAGCACCAACATCCCATTGGCTTCGATATCT
TGATGACCAAATACCGTAATGACTGCCAAGCCGAGCAGCGCTTACGGGCGGTTATAGGTGGGTGGTTGCATAAGCGACCA
CATCCAGCGCGAGCTATTGCTGCCTGCCAGTTGGCACTTAATATGGTATTGGATAGAAACCTTCCGGCGCAGGTAGAGCA
AATTGCCACTTTACTGCGTCGTTACGGCTCCCGTACAGGTATCACCAGAAAAGTCGTTGATGGACTCCAGCAGCAAATCA
AATTACTGGAAAGAGATAAAGCGCAGGCACTTGATGATGGCACTATCGCATTACTGGCAGACGAAATAAAAACCCTTCAG
TCTAAAATCAAAACAGAACGTGGTGCACTGCGGGCGTGGGCTAATCATCAGGCGGCGATAAAGCAAGTCTGCCCCCGTTG
TCACGGTGCCGGTAAAACCCTGCGGCCTCATCCCGAAATATGCAACGAGTGCGGCGGCAGTGGCCGTATACCGCCTACAA
TGGAACACCTGCGCAAATCTATGGGTATCATAGGGGCTGAGATATCCGGTGGGGATTGGGCGGCGCAATATGTGCCTCTG
GTTAAAGAATGTATGCATTGGCTATATGTTGAAGAATCGAGTGCTGGTGAGGTTTTAATTGAAAGAATTCAGCTAGAAAA
AGACTTTTGA

Upstream 100 bases:

>100_bases
CAAAGTGATTTCATTTTTTGCAATAATTTAATTATTATTGCGATTTGTGAAATGAACTATAAAATCAGTCCTGTGAATTT
AAAACACAGGACTGACCAAT

Downstream 100 bases:

>100_bases
CCAATGATTGACCCTACATCATTAACGCGCTAAATTACACAAAGATGCCGGAGTATGCTTAAAAGCTGCTCCGGTTTTTT
ATTGGTCAGTTCCGGTCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MTTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRNDCQAEQRLRAVIGGWLHKRP
HPARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTGITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQ
SKIKTERGALRAWANHQAAIKQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPL
VKECMHWLYVEESSAGEVLIERIQLEKDF

Sequences:

>Translated_269_residues
MTTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRNDCQAEQRLRAVIGGWLHKRP
HPARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTGITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQ
SKIKTERGALRAWANHQAAIKQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPL
VKECMHWLYVEESSAGEVLIERIQLEKDF
>Mature_268_residues
TTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRNDCQAEQRLRAVIGGWLHKRPH
PARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTGITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQS
KIKTERGALRAWANHQAAIKQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPLV
KECMHWLYVEESSAGEVLIERIQLEKDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30006; Mature: 29875

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRN
CCHHHHHHHHHCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH
DCQAEQRLRAVIGGWLHKRPHPARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
ITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQSKIKTERGALRAWANHQAAI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPL
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHH
VKECMHWLYVEESSAGEVLIERIQLEKDF
HHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTAIEQLIKMHDPRCVSIESLNIGRGRAVLTKDQILGTFATCQHQHPIGFDILMTKYRN
CHHHHHHHHHCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHH
DCQAEQRLRAVIGGWLHKRPHPARAIAACQLALNMVLDRNLPAQVEQIATLLRRYGSRTG
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
ITRKVVDGLQQQIKLLERDKAQALDDGTIALLADEIKTLQSKIKTERGALRAWANHQAAI
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQVCPRCHGAGKTLRPHPEICNECGGSGRIPPTMEHLRKSMGIIGAEISGGDWAAQYVPL
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHHH
VKECMHWLYVEESSAGEVLIERIQLEKDF
HHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA