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The map label for this gene is essD [H]

Identifier: 51596139

GI number: 51596139

Start: 2151960

End: 2152172

Strand: Direct

Name: essD [H]

Synonym: YPTB1804

Alternate gene names: 51596139

Gene position: 2151960-2152172 (Clockwise)

Preceding gene: 51596138

Following gene: 51596140

Centisome position: 45.36

GC content: 48.36

Gene sequence:

>213_bases
ATGAAAATGGAGAGGCTCACAACCGGTATCTCTTATACCGCGAGCGGTGGCGGCGCACTGTTTTGGTTTAAACAATTACT
GAATGGATTTGCCCCTGAGCAATGGGCGGCTATTGGTGTGCTGGGTAGCTTGATGTTTGCTTTCCTAACATTCCTAACCA
ACCTATATTTCAAGGTGCGCGAAGATAAGCGGAAAGCGGCGAAGGGGGAATAA

Upstream 100 bases:

>100_bases
GGTTTTTTATTGGTCAGTTCCGGTCAGTCCTGACTACACCCAAAGCCTGCATGGTTCGCCCAGCAGGCTTTTTTATTTCC
CCAAGCCGGGGAGGTGGAGC

Downstream 100 bases:

>100_bases
TGGCAATGTCCCCCGCGTTGCGCAAGAAAGTCATGGGTGCGGCAATCGGCGGTGCAATGGCAATAGCAATCGCCATGGTG
GGCGGCAGCGATGGTCTGGA

Product: holin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MKMERLTTGISYTASGGGALFWFKQLLNGFAPEQWAAIGVLGSLMFAFLTFLTNLYFKVREDKRKAAKGE

Sequences:

>Translated_70_residues
MKMERLTTGISYTASGGGALFWFKQLLNGFAPEQWAAIGVLGSLMFAFLTFLTNLYFKVREDKRKAAKGE
>Mature_70_residues
MKMERLTTGISYTASGGGALFWFKQLLNGFAPEQWAAIGVLGSLMFAFLTFLTNLYFKVREDKRKAAKGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lambda phage S protein family [H]

Homologues:

Organism=Escherichia coli, GI1786767, Length=68, Percent_Identity=66.1764705882353, Blast_Score=100, Evalue=2e-23,
Organism=Escherichia coli, GI87081934, Length=68, Percent_Identity=64.7058823529412, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007054 [H]

Pfam domain/function: PF04971 Lysis_S [H]

EC number: NA

Molecular weight: Translated: 7826; Mature: 7826

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMERLTTGISYTASGGGALFWFKQLLNGFAPEQWAAIGVLGSLMFAFLTFLTNLYFKVR
CCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDKRKAAKGE
HHHHHCCCCC
>Mature Secondary Structure
MKMERLTTGISYTASGGGALFWFKQLLNGFAPEQWAAIGVLGSLMFAFLTFLTNLYFKVR
CCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EDKRKAAKGE
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]