| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51596137
Identifier: 51596137
GI number: 51596137
Start: 2150208
End: 2150666
Strand: Direct
Name: 51596137
Synonym: YPTB1802
Alternate gene names: NA
Gene position: 2150208-2150666 (Clockwise)
Preceding gene: 51596136
Following gene: 51596138
Centisome position: 45.32
GC content: 44.44
Gene sequence:
>459_bases TTGATAAATAAAATTGATGCCATTGACCTTGTTCGAACAAAAGCCAAGCTGGAAGTACGAAATGGAACGGTTCACAAGGT TAACCACCAGGCAGAAACCGAAGAACAGGCAGCGCTGATTGAGTGGGCAGATAAAACCGTTATCGATGGTATTTGTATCG GGGATTATCTGATCCATATACCCAATGAAGGGAAACGTGGACCAAAGGCGGCGAGGGATGCCAAGCGGCTAGGTTTGAGG AAAGGCGTACCAGATTTGTTTCTGGCGCTGCCGCGCGGTGGGTATGCGGGGTTGTGGATAGAGATGAAGAGTAGCAAGGG ACATGTAAATAATAATCAGAATTGTTGGTTATCGAAACTTGGCGACATAGGTTACAAAGTAGATGTCTCCTACAGTTTCT TAAGTGCTAAAGGTGCTATTATTTCTTACTTAGTAAATGGCAAATACCTTGGGGGTTAA
Upstream 100 bases:
>100_bases AGAGTGGGACTGGTTTGTGTTTGGCAGGTTTGGGTTGGGGCGAATTTGCTCTCCTTCCAGAAAAATATAACTATCTATTA GACGATAAACTGACGAAAAT
Downstream 100 bases:
>100_bases ATGAAAAACTATAGTAGTTTCTTAATAGATCCAGATAACAAAGGATGGGTGCTCGGATACGGAGTTTTCCGCAATTCACC GTGGCACTTTGTTGAAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: VRR-NUC Domain-Containing Protein
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MINKIDAIDLVRTKAKLEVRNGTVHKVNHQAETEEQAALIEWADKTVIDGICIGDYLIHIPNEGKRGPKAARDAKRLGLR KGVPDLFLALPRGGYAGLWIEMKSSKGHVNNNQNCWLSKLGDIGYKVDVSYSFLSAKGAIISYLVNGKYLGG
Sequences:
>Translated_152_residues MINKIDAIDLVRTKAKLEVRNGTVHKVNHQAETEEQAALIEWADKTVIDGICIGDYLIHIPNEGKRGPKAARDAKRLGLR KGVPDLFLALPRGGYAGLWIEMKSSKGHVNNNQNCWLSKLGDIGYKVDVSYSFLSAKGAIISYLVNGKYLGG >Mature_152_residues MINKIDAIDLVRTKAKLEVRNGTVHKVNHQAETEEQAALIEWADKTVIDGICIGDYLIHIPNEGKRGPKAARDAKRLGLR KGVPDLFLALPRGGYAGLWIEMKSSKGHVNNNQNCWLSKLGDIGYKVDVSYSFLSAKGAIISYLVNGKYLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16690; Mature: 16690
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKIDAIDLVRTKAKLEVRNGTVHKVNHQAETEEQAALIEWADKTVIDGICIGDYLIHI CCCCCCHHHHHHHCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCHHCCEEEECCEEEEC PNEGKRGPKAARDAKRLGLRKGVPDLFLALPRGGYAGLWIEMKSSKGHVNNNQNCWLSKL CCCCCCCCHHHHHHHHHHHHCCCCHHEEECCCCCCEEEEEEEECCCCCCCCCCCEEHEEC GDIGYKVDVSYSFLSAKGAIISYLVNGKYLGG CCCCEEEEEEEEEEHHCCCEEEEEECCEECCC >Mature Secondary Structure MINKIDAIDLVRTKAKLEVRNGTVHKVNHQAETEEQAALIEWADKTVIDGICIGDYLIHI CCCCCCHHHHHHHCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCHHCCEEEECCEEEEC PNEGKRGPKAARDAKRLGLRKGVPDLFLALPRGGYAGLWIEMKSSKGHVNNNQNCWLSKL CCCCCCCCHHHHHHHHHHHHCCCCHHEEECCCCCCEEEEEEEECCCCCCCCCCCEEHEEC GDIGYKVDVSYSFLSAKGAIISYLVNGKYLGG CCCCEEEEEEEEEEHHCCCEEEEEECCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA