| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yxlA [H]
Identifier: 50843646
GI number: 50843646
Start: 2394342
End: 2395829
Strand: Reverse
Name: yxlA [H]
Synonym: PPA2211
Alternate gene names: 50843646
Gene position: 2395829-2394342 (Counterclockwise)
Preceding gene: 50843647
Following gene: 50843638
Centisome position: 93.58
GC content: 52.62
Gene sequence:
>1488_bases GTGGTGTCCGCGCCAAATAGTGCTCAGGATGAAGTTCGTCATGGAAATACGGCTCCAACCGCTTCTGGGGCTGGTCGCGG TGTTGAGAAGCGAACGATTGATATGGTTCCTGACGGCGAAAGGCACGGCACTCCGAAGAGTCAGTTCACACTGTGGTTCG GAGTGAATATGCAGATTACGGCTGTCGTGAATGGTGCTTTGGCGATTGTTTTCGGGGCCGATGTTGTATGGGCGATAATT GGCCTTTTTATTGGGCAAGTCATCGGCGGCGCTGTTATGGCGCTCCATTCCGCTCAGGGGCCCGCGCTGGGGCTCCCACA AATGATCAGTTCGCGGGCACAGTTTGGCGTTTATGGTGCTGCGCTTCCGCTGTTTCTCGTACTGCTTCTCTACTTTGGCT TCGCTGCTACTGGAACTGTCTTGGCTGGACAAGCTATCAACAATGCATTTGGTGTCCAGTCCAGGTGGATCGGAATACTG GTTTTTGCAGCTCTGACGGCAATTATTGCCATGTTTGGGTATGACCTAATCCACAAGCTGGTGAAGGTGTCATCGACAAT TGGCCTCCTGGGGCTGCTTTATGTCGCGGTTCGTCTGTTCCAAGTGAGTTCCTTTGGGCCGCAGCTGACCGATGTGCACT TCTCGGTGGTGCCTTTCCTCCTGTCGATTGCTTTAGCGGCAGGATGGCAGTTGACTTACGCACCGTATGCCAGTGATTAC TCACGCTATCTTCCCCGTGACACGAAGTTTGGGAGTGCGTGGTTCGGTCCCTTCGCGGGATCAGTACTTGGAGCTACGAT TTCGATGACGCTGGGTGTGTTCATTGCTGCTGCTGGTGGTCAAGCTTTCATTGGCGATCAGGTTGGGTTTATGGGGAACC TTGCCCAGAATCGTGTTTTGGCGATCTTGGTTTTCATCTCCATTGTGATTGGCAAGCTGACCATCAACACCTTGAATGCG TATGGCGGAGTCATGGCGTTGTCGACAGCTCTTTCGGGTTTCACCGGTAAGAGTAGTGTCTCTCCGAAGACTCGTTTCGG TTTCGTGATTGGTTTCAATGTTGTGGTTGTCCTGACGGCGCTCGCGGCGTCGTCGGATTTTCTGCAAGTTTTCAAGTCTT TCATCTTGACTCTGCTGATGTTTTTCCTGCCATGGTCGGCGATCAACTTGCTGAACTATTACCTTATATGTCGTCGCTGT ATTGACATTCCTGCGCTGTACACTCCGAGGGGCCGTTATGGCAAGCTCCACTGGCCGACCATTGTTGTTTATTTGCTAGG CGTGGTTGTGCAGATTCCGTTCATCTCTCAGGCCTTTTATGTGGGGCCGGTCGCCGCAGCGATGGGTGGAGCGGACATCT CGTGGCTCGTGGGCCTTGTTGTTACAGCGTTGGTATATTTTCCGCTTGGCAGACGAGCGTTTGATTACCCCTTGGAGATA GTCTATCCGAAGGATGTGGAGCTGGATCCAAGCATTGTTTCTCGGTAG
Upstream 100 bases:
>100_bases GGCACTATCCCGCAGGTGCAATGGGTATCTCGTTCAGAGAAGGATGAAGTCCTTGTGGGCGACTGTAAAGCGACATGGCC GTCGCTCGGTAGGAGGAATT
Downstream 100 bases:
>100_bases GTTGGTGATTTTGCTGTGGTTGTTCCTGGAGAACACCCGTATGCGAGTCATTTGCTTGGGGGAATGTAAATGGTCGTGGT CCACAGGCTTGTGGGACCAC
Product: purine cytosine permease-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 495
Protein sequence:
>495_residues MVSAPNSAQDEVRHGNTAPTASGAGRGVEKRTIDMVPDGERHGTPKSQFTLWFGVNMQITAVVNGALAIVFGADVVWAII GLFIGQVIGGAVMALHSAQGPALGLPQMISSRAQFGVYGAALPLFLVLLLYFGFAATGTVLAGQAINNAFGVQSRWIGIL VFAALTAIIAMFGYDLIHKLVKVSSTIGLLGLLYVAVRLFQVSSFGPQLTDVHFSVVPFLLSIALAAGWQLTYAPYASDY SRYLPRDTKFGSAWFGPFAGSVLGATISMTLGVFIAAAGGQAFIGDQVGFMGNLAQNRVLAILVFISIVIGKLTINTLNA YGGVMALSTALSGFTGKSSVSPKTRFGFVIGFNVVVVLTALAASSDFLQVFKSFILTLLMFFLPWSAINLLNYYLICRRC IDIPALYTPRGRYGKLHWPTIVVYLLGVVVQIPFISQAFYVGPVAAAMGGADISWLVGLVVTALVYFPLGRRAFDYPLEI VYPKDVELDPSIVSR
Sequences:
>Translated_495_residues MVSAPNSAQDEVRHGNTAPTASGAGRGVEKRTIDMVPDGERHGTPKSQFTLWFGVNMQITAVVNGALAIVFGADVVWAII GLFIGQVIGGAVMALHSAQGPALGLPQMISSRAQFGVYGAALPLFLVLLLYFGFAATGTVLAGQAINNAFGVQSRWIGIL VFAALTAIIAMFGYDLIHKLVKVSSTIGLLGLLYVAVRLFQVSSFGPQLTDVHFSVVPFLLSIALAAGWQLTYAPYASDY SRYLPRDTKFGSAWFGPFAGSVLGATISMTLGVFIAAAGGQAFIGDQVGFMGNLAQNRVLAILVFISIVIGKLTINTLNA YGGVMALSTALSGFTGKSSVSPKTRFGFVIGFNVVVVLTALAASSDFLQVFKSFILTLLMFFLPWSAINLLNYYLICRRC IDIPALYTPRGRYGKLHWPTIVVYLLGVVVQIPFISQAFYVGPVAAAMGGADISWLVGLVVTALVYFPLGRRAFDYPLEI VYPKDVELDPSIVSR >Mature_495_residues MVSAPNSAQDEVRHGNTAPTASGAGRGVEKRTIDMVPDGERHGTPKSQFTLWFGVNMQITAVVNGALAIVFGADVVWAII GLFIGQVIGGAVMALHSAQGPALGLPQMISSRAQFGVYGAALPLFLVLLLYFGFAATGTVLAGQAINNAFGVQSRWIGIL VFAALTAIIAMFGYDLIHKLVKVSSTIGLLGLLYVAVRLFQVSSFGPQLTDVHFSVVPFLLSIALAAGWQLTYAPYASDY SRYLPRDTKFGSAWFGPFAGSVLGATISMTLGVFIAAAGGQAFIGDQVGFMGNLAQNRVLAILVFISIVIGKLTINTLNA YGGVMALSTALSGFTGKSSVSPKTRFGFVIGFNVVVVLTALAASSDFLQVFKSFILTLLMFFLPWSAINLLNYYLICRRC IDIPALYTPRGRYGKLHWPTIVVYLLGVVVQIPFISQAFYVGPVAAAMGGADISWLVGLVVTALVYFPLGRRAFDYPLEI VYPKDVELDPSIVSR
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320902, Length=275, Percent_Identity=28, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6320903, Length=336, Percent_Identity=27.6785714285714, Blast_Score=67, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6320897, Length=320, Percent_Identity=27.8125, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 52812; Mature: 52812
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSAPNSAQDEVRHGNTAPTASGAGRGVEKRTIDMVPDGERHGTPKSQFTLWFGVNMQIT CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCEEEE AVVNGALAIVFGADVVWAIIGLFIGQVIGGAVMALHSAQGPALGLPQMISSRAQFGVYGA EEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHH ALPLFLVLLLYFGFAATGTVLAGQAINNAFGVQSRWIGILVFAALTAIIAMFGYDLIHKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKVSSTIGLLGLLYVAVRLFQVSSFGPQLTDVHFSVVPFLLSIALAAGWQLTYAPYASDY HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH SRYLPRDTKFGSAWFGPFAGSVLGATISMTLGVFIAAAGGQAFIGDQVGFMGNLAQNRVL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHHHHH AILVFISIVIGKLTINTLNAYGGVMALSTALSGFTGKSSVSPKTRFGFVIGFNVVVVLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHH LAASSDFLQVFKSFILTLLMFFLPWSAINLLNYYLICRRCIDIPALYTPRGRYGKLHWPT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH IVVYLLGVVVQIPFISQAFYVGPVAAAMGGADISWLVGLVVTALVYFPLGRRAFDYPLEI HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEE VYPKDVELDPSIVSR ECCCCCCCCHHHHCC >Mature Secondary Structure MVSAPNSAQDEVRHGNTAPTASGAGRGVEKRTIDMVPDGERHGTPKSQFTLWFGVNMQIT CCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCEEEEEECCEEEE AVVNGALAIVFGADVVWAIIGLFIGQVIGGAVMALHSAQGPALGLPQMISSRAQFGVYGA EEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCHHHH ALPLFLVLLLYFGFAATGTVLAGQAINNAFGVQSRWIGILVFAALTAIIAMFGYDLIHKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VKVSSTIGLLGLLYVAVRLFQVSSFGPQLTDVHFSVVPFLLSIALAAGWQLTYAPYASDY HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHH SRYLPRDTKFGSAWFGPFAGSVLGATISMTLGVFIAAAGGQAFIGDQVGFMGNLAQNRVL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEECCCHHHHHHHHHHHHH AILVFISIVIGKLTINTLNAYGGVMALSTALSGFTGKSSVSPKTRFGFVIGFNVVVVLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEEHHHHHHHHHHHHH LAASSDFLQVFKSFILTLLMFFLPWSAINLLNYYLICRRCIDIPALYTPRGRYGKLHWPT HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH IVVYLLGVVVQIPFISQAFYVGPVAAAMGGADISWLVGLVVTALVYFPLGRRAFDYPLEI HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEE VYPKDVELDPSIVSR ECCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]