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The map label for this gene is uxuR [C]

Identifier: 50843443

GI number: 50843443

Start: 2168978

End: 2169712

Strand: Direct

Name: uxuR [C]

Synonym: PPA1996

Alternate gene names: 50843443

Gene position: 2168978-2169712 (Clockwise)

Preceding gene: 50843438

Following gene: 50843449

Centisome position: 84.72

GC content: 61.9

Gene sequence:

>735_bases
ATGATTAACGGCATGTCAGATACGAACGATGCCGTCCACCTAGCCGATAACCTCAATCCGGCAGCTGAGCGGATGTTCAA
GTGGATTCTCTCCTCAGACCTTGCCCCCGGGGACCCCATCCCGATCGAACAGGACCTCGCGACCCAGTTCGGGATGGCCC
GTGGCACAGTTCGTGAAGCGGTGCGCGAATTACGCGCCCTAGGAATCCTTGAGGTGCGGCGTGGACTGGGGACCTACCTG
TCTACGGCATCTGCTTCGACGATTCGGCCCAGTCTCGTCTACCGGAGCGTCAAACAGATCACCACTGACGAGAGCGGCAC
CAGGGATTTCATCGGTCTGCGAGAAATGGTAGAGGTGCGGGCCCTTATGGAGTGCTCACTGGTCACCGAAGTCACCGGCC
GCATCAGCGCCGAGACCGGACGGGCCCTGCACGCCCTGGCAGCCCGGATGGACGACCCTAAGGACTCCGCCGCTGCGGAC
CGCCAGTTCCACCGACTGTTGTACGCGGACATGGGCAATCAACTCGCCCGCGAACTGATCGACGTCTTTTGGGACTCCCT
CAATCTCGCTGGGCTGATGCTTCCACCAACTAATACAATGCCGGCCACCCGCCACGCCCACGACCTCATCGCCGACTGCG
TTATCGGCCATGATCCACAGGCCAGTCGCGAGGCTATGTGGGACCACTTCGCCGCCATTCGGGAGAGGTTGGGAGGGGCA
CCCCGCACCTCCTGA

Upstream 100 bases:

>100_bases
GGCGACGCCTCTGACGTCGCTGTGTCTCCATTCTTCCGCCTTTTGCCACCTCACGTCACCCAAGCTGATTTTCTAGTGTC
GTCATCATGACGTCCATGCC

Downstream 100 bases:

>100_bases
AGAATGCACGCCACGCAACTTTGAAACAGTCAGCCTGACCTGACTAGCGGAGGATACGCGCCGGTGTGACATACCGAGAA
ACGTCCCGGCTTCGGCCTGG

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: GntR Domain Protein; GntR Domain-Containing Protein; Regulatory Protein GntR HTH; GntR-Family Transcriptional Regulator; Transcriptional Regulator GntR Family; GntR Family Regulatory Protein; Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator ExuR Family; Exu Regulon Transcriptional Regulator; D-Mannonate Oxidoreductase; Regulatory Protein GntR; Galactonate Operon Transcriptional Repressor; Transcriptional Regulator Protein GntR Family; L-Asparagine Operon Transcriptional Regulator Protein; Transcriptional Regulator GntR-Family; Transcriptional Regulator Protein; Gntr Domain Protein

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MINGMSDTNDAVHLADNLNPAAERMFKWILSSDLAPGDPIPIEQDLATQFGMARGTVREAVRELRALGILEVRRGLGTYL
STASASTIRPSLVYRSVKQITTDESGTRDFIGLREMVEVRALMECSLVTEVTGRISAETGRALHALAARMDDPKDSAAAD
RQFHRLLYADMGNQLARELIDVFWDSLNLAGLMLPPTNTMPATRHAHDLIADCVIGHDPQASREAMWDHFAAIRERLGGA
PRTS

Sequences:

>Translated_244_residues
MINGMSDTNDAVHLADNLNPAAERMFKWILSSDLAPGDPIPIEQDLATQFGMARGTVREAVRELRALGILEVRRGLGTYL
STASASTIRPSLVYRSVKQITTDESGTRDFIGLREMVEVRALMECSLVTEVTGRISAETGRALHALAARMDDPKDSAAAD
RQFHRLLYADMGNQLARELIDVFWDSLNLAGLMLPPTNTMPATRHAHDLIADCVIGHDPQASREAMWDHFAAIRERLGGA
PRTS
>Mature_244_residues
MINGMSDTNDAVHLADNLNPAAERMFKWILSSDLAPGDPIPIEQDLATQFGMARGTVREAVRELRALGILEVRRGLGTYL
STASASTIRPSLVYRSVKQITTDESGTRDFIGLREMVEVRALMECSLVTEVTGRISAETGRALHALAARMDDPKDSAAAD
RQFHRLLYADMGNQLARELIDVFWDSLNLAGLMLPPTNTMPATRHAHDLIADCVIGHDPQASREAMWDHFAAIRERLGGA
PRTS

Specific function: Repressor For The Uxurba Operon. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26809; Mature: 26809

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINGMSDTNDAVHLADNLNPAAERMFKWILSSDLAPGDPIPIEQDLATQFGMARGTVREA
CCCCCCCCCCCEEHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VRELRALGILEVRRGLGTYLSTASASTIRPSLVYRSVKQITTDESGTRDFIGLREMVEVR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALMECSLVTEVTGRISAETGRALHALAARMDDPKDSAAADRQFHRLLYADMGNQLARELI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DVFWDSLNLAGLMLPPTNTMPATRHAHDLIADCVIGHDPQASREAMWDHFAAIRERLGGA
HHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PRTS
CCCC
>Mature Secondary Structure
MINGMSDTNDAVHLADNLNPAAERMFKWILSSDLAPGDPIPIEQDLATQFGMARGTVREA
CCCCCCCCCCCEEHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
VRELRALGILEVRRGLGTYLSTASASTIRPSLVYRSVKQITTDESGTRDFIGLREMVEVR
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
ALMECSLVTEVTGRISAETGRALHALAARMDDPKDSAAADRQFHRLLYADMGNQLARELI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DVFWDSLNLAGLMLPPTNTMPATRHAHDLIADCVIGHDPQASREAMWDHFAAIRERLGGA
HHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
PRTS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA