| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yfjQ [H]
Identifier: 50843176
GI number: 50843176
Start: 1869663
End: 1870661
Strand: Reverse
Name: yfjQ [H]
Synonym: PPA1716
Alternate gene names: 50843176
Gene position: 1870661-1869663 (Counterclockwise)
Preceding gene: 50843177
Following gene: 50843174
Centisome position: 73.07
GC content: 56.46
Gene sequence:
>999_bases ATGAGCCTTTCCCAACTCTCCTCCCGAGTGTGGCAGTACGGCAAGGTCATCGCAGAGTCGGTGCCTTTGGAGACCCTAAA CGAGGAACTCTCCGATACCAGGACGCTTAGCTGGTACGATCTCACCGCTCCTGACCGTGAGGACATCGACATCTTGGCCG ATGAGCTTAATCTGGACTTTCACACTGTTGAGGATGCCGAGGCTCCCGGTGAGCGCCCGAAGGTTACTCGCTATCCTGAC CATCTCTTCCTCACGACCTACGCCGCGACCATTGGTGAGACCGATGATCCCAACAGTCGTTTGATCGTCTCGCGGGTTTC GGTGTGGGTGTTCGGGCACGGCGTCGTTAGCGTTCATCGCAACGATCTGCCAGAGATCGCGGAGGTACTCAACCGCCTCG ACGCGAACCCGGACCTCGTCTCGAATGGGCCGATGGGTATCGTCCACGCTATTCTCGATGTCCTTGTTGACGGCCATTTC GATACCGTTCAGCATCTCGACGACGTGGTTGAAGACGTAGAGGACCAGCTCTTCGACGACTCCATCGATACCCAGCAGGT GCAACTTCGGGTTTACCGGCTGCGCAAGGAGCTGGTGCAGTTTCGTCGGATCGTGCTTCCGATGCGCGAGATCGTCTCGA CGATTTGTCGTCCGAGTAGGGAAGCTGTTGCTGTTCCGCGTGTCCTTGAGCCTTATTTCAATGATCTTTACGATCACTCC ATGCGGGTGTCAGAGTGGTCCGACTCCCTGCGGGACCTGGTGGCGACGATTTTCGAGACGAATCTTTCCATCCAGGATGC CAAGCTCAACATCGTCATGAAGAAGCTGGCGGGTTGGGCGGCCATCATTGCGGTACCGACCTTTGTTACCGGGTGGTTTG GTCAGAATGTGCCCTTTTTGGGTGATGGACGACCCTTGGGGCTATGGATCTCTGCGGTGCTGGTCGTTGCGTCGAGTGTC CTCCTGTATTTGGTGTTCCGTAGGGAGGACTGGATATAA
Upstream 100 bases:
>100_bases TGGTGCCGCGTCACCGTCGGCGCATCGAGGCCGCGCTCAATCCTGCCGATACCGTCATCATGAGTTCGGACATGGTGAGC CCAGACATCCAGGAGGTCCG
Downstream 100 bases:
>100_bases GCAGCGGGCGGGTGATTGTGCGTGCTTGCGGGGGGCGGGACGTGCGCCATGGAAGGGTGACGAACTGACGCGGCCGGTGC ACGCTCGTGTCGAGGATCGT
Product: putative magnesium transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MSLSQLSSRVWQYGKVIAESVPLETLNEELSDTRTLSWYDLTAPDREDIDILADELNLDFHTVEDAEAPGERPKVTRYPD HLFLTTYAATIGETDDPNSRLIVSRVSVWVFGHGVVSVHRNDLPEIAEVLNRLDANPDLVSNGPMGIVHAILDVLVDGHF DTVQHLDDVVEDVEDQLFDDSIDTQQVQLRVYRLRKELVQFRRIVLPMREIVSTICRPSREAVAVPRVLEPYFNDLYDHS MRVSEWSDSLRDLVATIFETNLSIQDAKLNIVMKKLAGWAAIIAVPTFVTGWFGQNVPFLGDGRPLGLWISAVLVVASSV LLYLVFRREDWI
Sequences:
>Translated_332_residues MSLSQLSSRVWQYGKVIAESVPLETLNEELSDTRTLSWYDLTAPDREDIDILADELNLDFHTVEDAEAPGERPKVTRYPD HLFLTTYAATIGETDDPNSRLIVSRVSVWVFGHGVVSVHRNDLPEIAEVLNRLDANPDLVSNGPMGIVHAILDVLVDGHF DTVQHLDDVVEDVEDQLFDDSIDTQQVQLRVYRLRKELVQFRRIVLPMREIVSTICRPSREAVAVPRVLEPYFNDLYDHS MRVSEWSDSLRDLVATIFETNLSIQDAKLNIVMKKLAGWAAIIAVPTFVTGWFGQNVPFLGDGRPLGLWISAVLVVASSV LLYLVFRREDWI >Mature_331_residues SLSQLSSRVWQYGKVIAESVPLETLNEELSDTRTLSWYDLTAPDREDIDILADELNLDFHTVEDAEAPGERPKVTRYPDH LFLTTYAATIGETDDPNSRLIVSRVSVWVFGHGVVSVHRNDLPEIAEVLNRLDANPDLVSNGPMGIVHAILDVLVDGHFD TVQHLDDVVEDVEDQLFDDSIDTQQVQLRVYRLRKELVQFRRIVLPMREIVSTICRPSREAVAVPRVLEPYFNDLYDHSM RVSEWSDSLRDLVATIFETNLSIQDAKLNIVMKKLAGWAAIIAVPTFVTGWFGQNVPFLGDGRPLGLWISAVLVVASSVL LYLVFRREDWI
Specific function: Unknown
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37637; Mature: 37506
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00758 ARGE_DAPE_CPG2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSQLSSRVWQYGKVIAESVPLETLNEELSDTRTLSWYDLTAPDREDIDILADELNLDF CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCE HTVEDAEAPGERPKVTRYPDHLFLTTYAATIGETDDPNSRLIVSRVSVWVFGHGVVSVHR EECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHEEHEEECCEEEECC NDLPEIAEVLNRLDANPDLVSNGPMGIVHAILDVLVDGHFDTVQHLDDVVEDVEDQLFDD CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC SIDTQQVQLRVYRLRKELVQFRRIVLPMREIVSTICRPSREAVAVPRVLEPYFNDLYDHS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC MRVSEWSDSLRDLVATIFETNLSIQDAKLNIVMKKLAGWAAIIAVPTFVTGWFGQNVPFL CHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GDGRPLGLWISAVLVVASSVLLYLVFRREDWI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLSQLSSRVWQYGKVIAESVPLETLNEELSDTRTLSWYDLTAPDREDIDILADELNLDF CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCCCE HTVEDAEAPGERPKVTRYPDHLFLTTYAATIGETDDPNSRLIVSRVSVWVFGHGVVSVHR EECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEHHHHEEHEEECCEEEECC NDLPEIAEVLNRLDANPDLVSNGPMGIVHAILDVLVDGHFDTVQHLDDVVEDVEDQLFDD CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC SIDTQQVQLRVYRLRKELVQFRRIVLPMREIVSTICRPSREAVAVPRVLEPYFNDLYDHS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC MRVSEWSDSLRDLVATIFETNLSIQDAKLNIVMKKLAGWAAIIAVPTFVTGWFGQNVPFL CHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GDGRPLGLWISAVLVVASSVLLYLVFRREDWI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969503; 9384377 [H]