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The map label for this gene is 50843177

Identifier: 50843177

GI number: 50843177

Start: 1870658

End: 1871059

Strand: Reverse

Name: 50843177

Synonym: PPA1717

Alternate gene names: NA

Gene position: 1871059-1870658 (Counterclockwise)

Preceding gene: 50843181

Following gene: 50843176

Centisome position: 73.08

GC content: 61.94

Gene sequence:

>402_bases
GTGCTGTTGGTGCAGCGGGCCGATGACGGGCAATGGACTCCGGTCTGCGGAATTATAGAGCCGGGGGAGAGGCCCGATGA
GGCCATCCTTCGCGAGATCCACGAAGAGACAGGGGTAGTAGCAGAGGTCGTCCGACTAGTTCGGGTTAACGTGGCTGCCC
CCGTCACCTATCCCAATGGCGATCAGTGCCAGTTCCTCGACCACGACTTCTTGTGTCGGTGGGTGAGCGGTGAGCCCATG
GTCGGTGACGACGAGTCCAGCCATACCGGGTTCTTCAGCATCGACCAGCTGCCCCCGATGGTGCCGCGTCACCGTCGGCG
CATCGAGGCCGCGCTCAATCCTGCCGATACCGTCATCATGAGTTCGGACATGGTGAGCCCAGACATCCAGGAGGTCCGAT
GA

Upstream 100 bases:

>100_bases
ACAGTTCATCCTGGACCTGAGACGTCATATTGGCCATGCGCCATTATGGTTGGCCGGCAGTAGTGCGGTCGTGGTGCGTG
ATGGCCTTCGGAGGCCTCAG

Downstream 100 bases:

>100_bases
GCCTTTCCCAACTCTCCTCCCGAGTGTGGCAGTACGGCAAGGTCATCGCAGAGTCGGTGCCTTTGGAGACCCTAAACGAG
GAACTCTCCGATACCAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLLVQRADDGQWTPVCGIIEPGERPDEAILREIHEETGVVAEVVRLVRVNVAAPVTYPNGDQCQFLDHDFLCRWVSGEPM
VGDDESSHTGFFSIDQLPPMVPRHRRRIEAALNPADTVIMSSDMVSPDIQEVR

Sequences:

>Translated_133_residues
MLLVQRADDGQWTPVCGIIEPGERPDEAILREIHEETGVVAEVVRLVRVNVAAPVTYPNGDQCQFLDHDFLCRWVSGEPM
VGDDESSHTGFFSIDQLPPMVPRHRRRIEAALNPADTVIMSSDMVSPDIQEVR
>Mature_133_residues
MLLVQRADDGQWTPVCGIIEPGERPDEAILREIHEETGVVAEVVRLVRVNVAAPVTYPNGDQCQFLDHDFLCRWVSGEPM
VGDDESSHTGFFSIDQLPPMVPRHRRRIEAALNPADTVIMSSDMVSPDIQEVR

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 14892; Mature: 14892

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVQRADDGQWTPVCGIIEPGERPDEAILREIHEETGVVAEVVRLVRVNVAAPVTYPNG
CEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCC
DQCQFLDHDFLCRWVSGEPMVGDDESSHTGFFSIDQLPPMVPRHRRRIEAALNPADTVIM
CCEEEECCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEE
SSDMVSPDIQEVR
ECCCCCCCHHHCC
>Mature Secondary Structure
MLLVQRADDGQWTPVCGIIEPGERPDEAILREIHEETGVVAEVVRLVRVNVAAPVTYPNG
CEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEECCCC
DQCQFLDHDFLCRWVSGEPMVGDDESSHTGFFSIDQLPPMVPRHRRRIEAALNPADTVIM
CCEEEECCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEE
SSDMVSPDIQEVR
ECCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]