| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is pncB1 [H]
Identifier: 50843143
GI number: 50843143
Start: 1833164
End: 1834504
Strand: Direct
Name: pncB1 [H]
Synonym: PPA1681
Alternate gene names: 50843143
Gene position: 1833164-1834504 (Clockwise)
Preceding gene: 50843141
Following gene: 50843144
Centisome position: 71.6
GC content: 63.31
Gene sequence:
>1341_bases ATGTCGACCGCACTGTTCACCGACCACTACGAGCTAACCATGGTCGAAGCCGCCATGGCATCAGGGACTGCCAACCGCCG CTGTGTCTTTGAATTATTCCCCCGACGTCTGCCCGAAGGCCGCCGCTACGGCGTCGTAGCCGGTACCGGACGCGTCCTTG ATGCTGTCGAGAACTTCCGATTCACCGACGAGGACGTCTCCTTCCTGGAACGCACCGGGGTAGTCGGCCCGCACATGGCC GAGTGGCTGTCACACTACCGATTTACCGGATCCATCCACGGTTACGCTGAAGGCGATCTCTACTTTCCTGGTTCCCCGCT GCTCACCGTCGAGGGCACTTTCGCCGAAGCCTGCGTGCTCGAGACCGTGCTGCTCAGCATCTACAACCACGACTCAGCTA TCGCCTCCGCCGCATCCCGCATGGTCATGATGGGTGAAGGCCGCTCGATCATCGAAATGGGCTCGCGACGCACCCACGAA GAGTCCGCCGTCGCTGCCGCCCGTGCCGCGTGGATCGCCGGCTTCGGACCGACCTCTAACTTAGCCGCCGGGATCCGCTA TGGCGTCCCCACCTCTGGTACCGCTGCCCACGCCTTTACCCTCCTCCATGACACCGAGGAAGAGGCTTTTCGCGCCCAGC TAGCCGCCTACGGTGAAAAGACAACCCTTCTCGTCGACACCTATGACATTGACAATGCGGTACGCACGGCCATCCGCCTC ACCGAGGGACGCCTCGGCGCGGTCCGTATCGACTCCGGCGACCTGTCCATCGTCGCTCGTCAAGTCCGCAACTTGCTCGA CGACCTCGGCGCCCCGAACACTCGCGTCATCGTCACTAGCGACCTTGACGAATGGCAAATCGCCGCCCTGCGCGGTGCCC CCGTCGATGGATTCGGCGTCGGAACCTCCCTGGTAACCGGTTCGGGAGCTCCAACCTGCTCCTTCGTCTATAAGCTAGTC GCCCGCGCCACCTCAGACAGCCCCGACGCCGAGTTGCTGCCGGTGGCCAAGAAGTCGTCCCACAAAAACACTGTGGGCGG GCGAAAGTATGCGGTGCGCCGCATTGGCTCAGGTGGGATCGCCACCGCAGAGGTCGTCGGGGTGGGCCAACCGCCAGCCG CCGACGCTGACGACCGTAACCTCATCGTCCCGCTCATCGTCAACGGGGAAGTTGTGGGCCGTGAACCGCTGGAGACGGCG CGTAAACGTCACCAGGCTGCCATCGCTGAACTGCCAATTTCCGGACGACGCATCTCGCGTGGCGACCAGGCCATCCCCAC AGTCATGGTGAAGCAAGGCAACGACGGCGCTGACACCGTTCTTGGAGCATCCCTCTCCTGA
Upstream 100 bases:
>100_bases GTGGCTACAGACATGTGCTCATTCTGTCACCCAGGTGAGACACTCAAACTTCACCGACGCAAACATCCTCTAGAGCGCAC CCCCTCTTAGACTGTGACCC
Downstream 100 bases:
>100_bases GCACAACCCCAGGGGCACGGCCCAGAGCACGCCAGAAATACGACACGCAAGGTACCTCAGGGCCCGAAATCTGTCCAAAA GCCCCTTATGACGCGGTTTT
Product: nicotinate phosphoribosyltransferase
Products: NA
Alternate protein names: NAPRTase pncB1 [H]
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MSTALFTDHYELTMVEAAMASGTANRRCVFELFPRRLPEGRRYGVVAGTGRVLDAVENFRFTDEDVSFLERTGVVGPHMA EWLSHYRFTGSIHGYAEGDLYFPGSPLLTVEGTFAEACVLETVLLSIYNHDSAIASAASRMVMMGEGRSIIEMGSRRTHE ESAVAAARAAWIAGFGPTSNLAAGIRYGVPTSGTAAHAFTLLHDTEEEAFRAQLAAYGEKTTLLVDTYDIDNAVRTAIRL TEGRLGAVRIDSGDLSIVARQVRNLLDDLGAPNTRVIVTSDLDEWQIAALRGAPVDGFGVGTSLVTGSGAPTCSFVYKLV ARATSDSPDAELLPVAKKSSHKNTVGGRKYAVRRIGSGGIATAEVVGVGQPPAADADDRNLIVPLIVNGEVVGREPLETA RKRHQAAIAELPISGRRISRGDQAIPTVMVKQGNDGADTVLGASLS
Sequences:
>Translated_446_residues MSTALFTDHYELTMVEAAMASGTANRRCVFELFPRRLPEGRRYGVVAGTGRVLDAVENFRFTDEDVSFLERTGVVGPHMA EWLSHYRFTGSIHGYAEGDLYFPGSPLLTVEGTFAEACVLETVLLSIYNHDSAIASAASRMVMMGEGRSIIEMGSRRTHE ESAVAAARAAWIAGFGPTSNLAAGIRYGVPTSGTAAHAFTLLHDTEEEAFRAQLAAYGEKTTLLVDTYDIDNAVRTAIRL TEGRLGAVRIDSGDLSIVARQVRNLLDDLGAPNTRVIVTSDLDEWQIAALRGAPVDGFGVGTSLVTGSGAPTCSFVYKLV ARATSDSPDAELLPVAKKSSHKNTVGGRKYAVRRIGSGGIATAEVVGVGQPPAADADDRNLIVPLIVNGEVVGREPLETA RKRHQAAIAELPISGRRISRGDQAIPTVMVKQGNDGADTVLGASLS >Mature_445_residues STALFTDHYELTMVEAAMASGTANRRCVFELFPRRLPEGRRYGVVAGTGRVLDAVENFRFTDEDVSFLERTGVVGPHMAE WLSHYRFTGSIHGYAEGDLYFPGSPLLTVEGTFAEACVLETVLLSIYNHDSAIASAASRMVMMGEGRSIIEMGSRRTHEE SAVAAARAAWIAGFGPTSNLAAGIRYGVPTSGTAAHAFTLLHDTEEEAFRAQLAAYGEKTTLLVDTYDIDNAVRTAIRLT EGRLGAVRIDSGDLSIVARQVRNLLDDLGAPNTRVIVTSDLDEWQIAALRGAPVDGFGVGTSLVTGSGAPTCSFVYKLVA RATSDSPDAELLPVAKKSSHKNTVGGRKYAVRRIGSGGIATAEVVGVGQPPAADADDRNLIVPLIVNGEVVGREPLETAR KRHQAAIAELPISGRRISRGDQAIPTVMVKQGNDGADTVLGASLS
Specific function: Catalyzes the conversion of nicotinic acid (NA) to NA mononucleotide (NaMN) [H]
COG id: COG1488
COG function: function code H; Nicotinic acid phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAPRTase family [H]
Homologues:
Organism=Homo sapiens, GI194394158, Length=449, Percent_Identity=28.9532293986637, Blast_Score=142, Evalue=7e-34, Organism=Caenorhabditis elegans, GI71997952, Length=470, Percent_Identity=28.2978723404255, Blast_Score=167, Evalue=8e-42, Organism=Caenorhabditis elegans, GI71997947, Length=470, Percent_Identity=28.2978723404255, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI71997955, Length=204, Percent_Identity=34.8039215686275, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24581587, Length=471, Percent_Identity=26.1146496815287, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI161076680, Length=206, Percent_Identity=29.6116504854369, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24581595, Length=206, Percent_Identity=29.6116504854369, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI28574709, Length=206, Percent_Identity=29.6116504854369, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24581593, Length=206, Percent_Identity=29.6116504854369, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI24581591, Length=206, Percent_Identity=29.6116504854369, Blast_Score=89, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015977 - InterPro: IPR007229 - InterPro: IPR006405 - InterPro: IPR002638 [H]
Pfam domain/function: PF04095 NAPRTase [H]
EC number: =2.4.2.11 [H]
Molecular weight: Translated: 47431; Mature: 47300
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTALFTDHYELTMVEAAMASGTANRRCVFELFPRRLPEGRRYGVVAGTGRVLDAVENFR CCCEEEECCCEEEEHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCC FTDEDVSFLERTGVVGPHMAEWLSHYRFTGSIHGYAEGDLYFPGSPLLTVEGTFAEACVL CCCHHHHHHHHCCCCCCHHHHHHHHHEEECEECCEECCCEEECCCCEEEEECCHHHHHHH ETVLLSIYNHDSAIASAASRMVMMGEGRSIIEMGSRRTHEESAVAAARAAWIAGFGPTSN HHHHHHHHCCCHHHHHHHHCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCC LAAGIRYGVPTSGTAAHAFTLLHDTEEEAFRAQLAAYGEKTTLLVDTYDIDNAVRTAIRL HHCCEEECCCCCCCHHHEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHE TEGRLGAVRIDSGDLSIVARQVRNLLDDLGAPNTRVIVTSDLDEWQIAALRGAPVDGFGV ECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCC GTSLVTGSGAPTCSFVYKLVARATSDSPDAELLPVAKKSSHKNTVGGRKYAVRRIGSGGI CCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHEEEECCCCCC ATAEVVGVGQPPAADADDRNLIVPLIVNGEVVGREPLETARKRHQAAIAELPISGRRISR EEEEEEECCCCCCCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC GDQAIPTVMVKQGNDGADTVLGASLS CCCCCCEEEEECCCCCCCCEECCCCC >Mature Secondary Structure STALFTDHYELTMVEAAMASGTANRRCVFELFPRRLPEGRRYGVVAGTGRVLDAVENFR CCEEEECCCEEEEHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCC FTDEDVSFLERTGVVGPHMAEWLSHYRFTGSIHGYAEGDLYFPGSPLLTVEGTFAEACVL CCCHHHHHHHHCCCCCCHHHHHHHHHEEECEECCEECCCEEECCCCEEEEECCHHHHHHH ETVLLSIYNHDSAIASAASRMVMMGEGRSIIEMGSRRTHEESAVAAARAAWIAGFGPTSN HHHHHHHHCCCHHHHHHHHCEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHEECCCCCCC LAAGIRYGVPTSGTAAHAFTLLHDTEEEAFRAQLAAYGEKTTLLVDTYDIDNAVRTAIRL HHCCEEECCCCCCCHHHEEEEEECCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHE TEGRLGAVRIDSGDLSIVARQVRNLLDDLGAPNTRVIVTSDLDEWQIAALRGAPVDGFGV ECCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCC GTSLVTGSGAPTCSFVYKLVARATSDSPDAELLPVAKKSSHKNTVGGRKYAVRRIGSGGI CCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCHHHEEEECCCCCC ATAEVVGVGQPPAADADDRNLIVPLIVNGEVVGREPLETARKRHQAAIAELPISGRRISR EEEEEEECCCCCCCCCCCCCEEEEEEECCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC GDQAIPTVMVKQGNDGADTVLGASLS CCCCCCEEEEECCCCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]