| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843141
Identifier: 50843141
GI number: 50843141
Start: 1831684
End: 1832229
Strand: Direct
Name: 50843141
Synonym: PPA1678
Alternate gene names: NA
Gene position: 1831684-1832229 (Clockwise)
Preceding gene: 50843140
Following gene: 50843143
Centisome position: 71.54
GC content: 64.65
Gene sequence:
>546_bases GTGATGAAGCTCGCCTGTCATCCCTCCACCGCCGTTCATCCGGAGACGACCACCGACCCTGCCACCCTGCGCTGGGTGGT CTCCGGGATCACGCTGCCCTTCGCCGGGCTCTTGGTAAGCGCCCCCGGCCTCGACGAGTTCCTCAACCAGGTACGCGTCG AGGCGACGGTCGGCGCCGTCATGGCGACTGTTCTCGAGGGCACATGGGAACGCATCGGTGCCGGATTCCGGACTGCCTTA ACCACAGCCTTGGAACGCACCGATGAATGGGTGGGCGGCCCTGACAGCAAGCCCCTCAACGAAGTCGAGACACTGCGCCG GTGCGCCGATGAACTCATCGGCGGGCCCGTCGGCGCGGTTGCCGCGATGCACGGAGGGTCAATCGAATTGGTCGACGTGT CGGTCGGTGACGAAGAGCGCAGAGTCGACGTCACCATGAAGGGAGCATGCCGAGGTTGCCCGGCAGCCATCATGACCCTA CATCAGCGCCTGGAACGTCAACTGAGTCTGCGATTGCGCGAGCCGGTCACCGTACGGGAAATCTGA
Upstream 100 bases:
>100_bases AGACCGGCGGATGGAAGTGGCCCGCCGTGGCCTTCGGGTATATGTTCGTGCTGGCTTGGGTCATGGCCTTCATCGGACGT CTCGTGACAGGTCTGCTGAT
Downstream 100 bases:
>100_bases CACCTACTCCGACAGCTCCACCTCAACGAGCACCTCCACGACGAGGCCAAGCCACTCGTAGACGCACTCCTCCTCGGCAC CCAATTCCTCCCGGGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MMKLACHPSTAVHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEATVGAVMATVLEGTWERIGAGFRTAL TTALERTDEWVGGPDSKPLNEVETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTL HQRLERQLSLRLREPVTVREI
Sequences:
>Translated_181_residues MMKLACHPSTAVHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEATVGAVMATVLEGTWERIGAGFRTAL TTALERTDEWVGGPDSKPLNEVETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTL HQRLERQLSLRLREPVTVREI >Mature_181_residues MMKLACHPSTAVHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEATVGAVMATVLEGTWERIGAGFRTAL TTALERTDEWVGGPDSKPLNEVETLRRCADELIGGPVGAVAAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTL HQRLERQLSLRLREPVTVREI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19454; Mature: 19454
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKLACHPSTAVHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEATVGAV CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MATVLEGTWERIGAGFRTALTTALERTDEWVGGPDSKPLNEVETLRRCADELIGGPVGAV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH AAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQRLERQLSLRLREPVTVRE HHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC I C >Mature Secondary Structure MMKLACHPSTAVHPETTTDPATLRWVVSGITLPFAGLLVSAPGLDEFLNQVRVEATVGAV CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH MATVLEGTWERIGAGFRTALTTALERTDEWVGGPDSKPLNEVETLRRCADELIGGPVGAV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH AAMHGGSIELVDVSVGDEERRVDVTMKGACRGCPAAIMTLHQRLERQLSLRLREPVTVRE HHHCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA