Click here to switch to the map view.

The map label for this gene is rpiB [H]

Identifier: 50843092

GI number: 50843092

Start: 1762095

End: 1762568

Strand: Reverse

Name: rpiB [H]

Synonym: PPA1624

Alternate gene names: 50843092

Gene position: 1762568-1762095 (Counterclockwise)

Preceding gene: 161621794

Following gene: 50843091

Centisome position: 68.84

GC content: 58.23

Gene sequence:

>474_bases
ATGACCTTTAAGCCTTCACATGTTCATATCGGCACCGACCATGCGGCCTTTGAGCTTAAGGAGTACCTCGTTGGCAAGTT
GACCGAAGCTGGATACCAGGTCGTCGATCATGGTGCGGCTAGCTATGACTCTCAGGATGACTATCCCGACTACTGCATCC
CGTGTGCTCAGGCCGTGATGGCCGACCCGGGGTCGCTTGGCATCGTGCTGGGTGGTTCCGGCAACGGAGAGCAGATCGCT
GCGAACAAGGTCAAGGGGATTCGCGCCGCACTGGCGTACACCGTCGAGATCGCGGAACTGGCACGTCTCCACAACAATGC
GAACGTTGTCTCTTTGGGTGGCCGGATGCAGACTCAGGAGGAAGCCTGGCAGATCGTCGAAACTTTCCTGACGACCGATT
TCTCCCCCGAGGACCGCCACCAGCGTCGTATTGACAAGCTCATTCGCTGGGAGGACAAGGGCTCACTGGGGTGA

Upstream 100 bases:

>100_bases
CGGGGACCTGAACAGATGAGGTGCTTTCAGCCATAGCCTTCACGCTATCGAAGATGATCTACGACACTGACTGGCCGGGT
CTAGGTGCCATGATGGAGGC

Downstream 100 bases:

>100_bases
GTTCTCCTGCCCTGAATTATTGACGTGACTGGCGGTGGCTCGACGTTGAAGATCCGCCAGTATCGTCTTCCACTCCTGAC
CCGGCTCGGGCATCTGGGAC

Product: ribose-5-phosphate isomerase B

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MTFKPSHVHIGTDHAAFELKEYLVGKLTEAGYQVVDHGAASYDSQDDYPDYCIPCAQAVMADPGSLGIVLGGSGNGEQIA
ANKVKGIRAALAYTVEIAELARLHNNANVVSLGGRMQTQEEAWQIVETFLTTDFSPEDRHQRRIDKLIRWEDKGSLG

Sequences:

>Translated_157_residues
MTFKPSHVHIGTDHAAFELKEYLVGKLTEAGYQVVDHGAASYDSQDDYPDYCIPCAQAVMADPGSLGIVLGGSGNGEQIA
ANKVKGIRAALAYTVEIAELARLHNNANVVSLGGRMQTQEEAWQIVETFLTTDFSPEDRHQRRIDKLIRWEDKGSLG
>Mature_156_residues
TFKPSHVHIGTDHAAFELKEYLVGKLTEAGYQVVDHGAASYDSQDDYPDYCIPCAQAVMADPGSLGIVLGGSGNGEQIAA
NKVKGIRAALAYTVEIAELARLHNNANVVSLGGRMQTQEEAWQIVETFLTTDFSPEDRHQRRIDKLIRWEDKGSLG

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=146, Percent_Identity=36.986301369863, Blast_Score=88, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011860
- InterPro:   IPR003500 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 17175; Mature: 17044

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKPSHVHIGTDHAAFELKEYLVGKLTEAGYQVVDHGAASYDSQDDYPDYCIPCAQAVM
CCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ADPGSLGIVLGGSGNGEQIAANKVKGIRAALAYTVEIAELARLHNNANVVSLGGRMQTQE
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHH
EAWQIVETFLTTDFSPEDRHQRRIDKLIRWEDKGSLG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TFKPSHVHIGTDHAAFELKEYLVGKLTEAGYQVVDHGAASYDSQDDYPDYCIPCAQAVM
CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
ADPGSLGIVLGGSGNGEQIAANKVKGIRAALAYTVEIAELARLHNNANVVSLGGRMQTQE
CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHH
EAWQIVETFLTTDFSPEDRHQRRIDKLIRWEDKGSLG
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA