| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842853
Identifier: 50842853
GI number: 50842853
Start: 1493176
End: 1493754
Strand: Direct
Name: 50842853
Synonym: PPA1371
Alternate gene names: NA
Gene position: 1493176-1493754 (Clockwise)
Preceding gene: 50842851
Following gene: 50842865
Centisome position: 58.32
GC content: 62.0
Gene sequence:
>579_bases GTGTTACCCATTCCCGAGATCCCTGAACCGGTGACGAAAGCTCTCCATAACGCACTGGAGATGGGCTATTTCACCACCAC CCGCAATGAGACCGGCCGATTCATGGCTACCCTGGCGGCCGGGGTACATGGCGCCATTGGGGAGTGCGAAACGGGGTCTG GGGCAGGAGCTGCCTGGCTACGACTGGGGGCACGAAAACGCACCAGGGTTGTCAGTTACGAACCAGATCCCACGGTCTGC GCCCGAGCTCGCGAGGTCTTGGCTGACCTCGATATCGAGGTCATCGAGGGCACCTGGGATGACCTGCTCGATCACGGCCC CTTCGGCCTGCTCTCGGTACCGATCCGAGTAGCGAGAGCGCACGATGTTGACGAGATTCTCAAGGCGGTCTCGGTCGGAG GCCTCGTCGTCATCGACGATATGCCCCCCAGCCATGGTTTTCCTCCCCACGACATCAATGGCACCGTCGATACCACCAGG CTGGCCTGGCTGACCCACCCGAAGGTGCACGCCACCGAGATTCAGCTTGCCTCCGACATGGCGGCCATCGTTGCCTGTCG GCTATCTGCTCGAGGCTGA
Upstream 100 bases:
>100_bases CGAGATCGGGCGAGACATTGCCCAACGCATCTGACCCAACCAACTACCAGCTAACCGCCCTCACAAAAAGTTCGAAGATA CCGACTGGCAGAATGGCCCC
Downstream 100 bases:
>100_bases CGAGGCAGAGGATACAGAATTGAGGGCCCGCGGTACCTACGGGCCCTCAACGTCAGGCCAGCAGGCTCAACGAGCCACGC TGCCTTCGGTGTAGTCGTCA
Product: putative transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLPIPEIPEPVTKALHNALEMGYFTTTRNETGRFMATLAAGVHGAIGECETGSGAGAAWLRLGARKRTRVVSYEPDPTVC ARAREVLADLDIEVIEGTWDDLLDHGPFGLLSVPIRVARAHDVDEILKAVSVGGLVVIDDMPPSHGFPPHDINGTVDTTR LAWLTHPKVHATEIQLASDMAAIVACRLSARG
Sequences:
>Translated_192_residues MLPIPEIPEPVTKALHNALEMGYFTTTRNETGRFMATLAAGVHGAIGECETGSGAGAAWLRLGARKRTRVVSYEPDPTVC ARAREVLADLDIEVIEGTWDDLLDHGPFGLLSVPIRVARAHDVDEILKAVSVGGLVVIDDMPPSHGFPPHDINGTVDTTR LAWLTHPKVHATEIQLASDMAAIVACRLSARG >Mature_192_residues MLPIPEIPEPVTKALHNALEMGYFTTTRNETGRFMATLAAGVHGAIGECETGSGAGAAWLRLGARKRTRVVSYEPDPTVC ARAREVLADLDIEVIEGTWDDLLDHGPFGLLSVPIRVARAHDVDEILKAVSVGGLVVIDDMPPSHGFPPHDINGTVDTTR LAWLTHPKVHATEIQLASDMAAIVACRLSARG
Specific function: Unknown
COG id: COG4122
COG function: function code R; Predicted O-methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20574; Mature: 20574
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPIPEIPEPVTKALHNALEMGYFTTTRNETGRFMATLAAGVHGAIGECETGSGAGAAWL CCCCCCCCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RLGARKRTRVVSYEPDPTVCARAREVLADLDIEVIEGTWDDLLDHGPFGLLSVPIRVARA HHCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCHHHHHHHHHHC HDVDEILKAVSVGGLVVIDDMPPSHGFPPHDINGTVDTTRLAWLTHPKVHATEIQLASDM CCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH AAIVACRLSARG HHHHHHHHCCCC >Mature Secondary Structure MLPIPEIPEPVTKALHNALEMGYFTTTRNETGRFMATLAAGVHGAIGECETGSGAGAAWL CCCCCCCCHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RLGARKRTRVVSYEPDPTVCARAREVLADLDIEVIEGTWDDLLDHGPFGLLSVPIRVARA HHCCCCCCEEEEECCCCHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCHHHHHHHHHHC HDVDEILKAVSVGGLVVIDDMPPSHGFPPHDINGTVDTTRLAWLTHPKVHATEIQLASDM CCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH AAIVACRLSARG HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA