| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is gluQ
Identifier: 50842865
GI number: 50842865
Start: 1503535
End: 1504578
Strand: Direct
Name: gluQ
Synonym: PPA1383
Alternate gene names: 50842865
Gene position: 1503535-1504578 (Clockwise)
Preceding gene: 50842853
Following gene: 50842889
Centisome position: 58.73
GC content: 63.51
Gene sequence:
>1044_bases ATGCCCGCCGCGTCACCCCAATTGTTGCCTACACTGCCGCTCGTGACCGATTTCGCCACCACTCACTCCGGTCTTCGACA CGCAGCTGGCCGTTTCGCCCCCTCCCCAACCTCAGCACTGCATCTGGGGAACCTCCGCACCGCATTAGCGGCCTGGCTTT TGGCACGCTCGACAGGTCGTCGGTTCGTGGTACGCATCGAGGATTTAGATCGTGCGCGGGTGGCCGCGGCCGGAAAAATT GCCTCGACTCAACTACGCGACCTGGAGTCCCTAGGTCTGGATTGGGATGGTCCAGTCGTCCGACAGTCTGAGCGCCTCGA CTTGTACGCCGACGCAGTAGCGGGTCTGGAAACCTACCCCTGTTTTTGCACTCGCAGGGAAATCGCTGCGGCCACTACCG CCCCCAACGAGGCCGATTGGCGCCCGTATCCGGGTACCTGCCGCCGCCTCACCGTCCAGCAGAGACACGAACGTCTGACC ACCCGGGCGCCAGCCACCCGACTGGCCAGTCAACTGAACACTTTCGAAGCGACCGACCTCGCTCGCGGCTGTGCTCGAGG ACGGGTGGACGATCTTGTCCTGGTGCGCAATGACGGCACGCCGGCCTACAACCTTGCGGTAGTCGTCGACGACGGTCTGC AAGGGGTCGATCAGGTCGTTCGAGCCCGAGACCTATGGTCCTCGGCCCCTCGCCAAGCCCAGTTGGCCGAACTGCTCGGA TTTATCCCTCCGGTCTACGCCCACACCGGTCTTGTCACCGGTCCAGGAGGGGTACGCTTGTCAAAGTCGGCGGGTGCGGC GGGGCTGTCCGATCTCGTGGATTCAGGTATTGACCACCGCCAGGTCGTGGCGTGGCTCTGCCGTTCCCTCGGACTCCCTG AAGTTGCTGATCCCCATGAGCTCGTCAACAATGTGGCCCTGACACCGCCTACCCCTGTTGCGGGCATTCACCGCTTAGAT CCTAGGCCTCTTGGCGGAGCGATGGGGTGGTGGAGTGATGCGGTTCTCGATGTGGCGGTGCTGCGCGAGACCCGTCGACC CTAA
Upstream 100 bases:
>100_bases TGACCAGGAGAGCGATGACGAGGTTAACCAATCTCTCCGAACGCTGTGCAGCCATCGGCACCCTCCTTCCAGCGTCCCAG CCTACCCATCTGACGGGGGC
Downstream 100 bases:
>100_bases GACACATATCGGCCGACATGTCTCGCGCAAAGCCATCGCCACTCAGGATTCTTTTTGAGCCGAAAGGATGTCGATAACGT AGATCAGGGTCTCGCCCTTC
Product: glutamyl-tRNA synthetase
Products: AMP; diphosphate; L-glutamyl-tRNA(Glu)
Alternate protein names: Glu-Q-RSs
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MPAASPQLLPTLPLVTDFATTHSGLRHAAGRFAPSPTSALHLGNLRTALAAWLLARSTGRRFVVRIEDLDRARVAAAGKI ASTQLRDLESLGLDWDGPVVRQSERLDLYADAVAGLETYPCFCTRREIAAATTAPNEADWRPYPGTCRRLTVQQRHERLT TRAPATRLASQLNTFEATDLARGCARGRVDDLVLVRNDGTPAYNLAVVVDDGLQGVDQVVRARDLWSSAPRQAQLAELLG FIPPVYAHTGLVTGPGGVRLSKSAGAAGLSDLVDSGIDHRQVVAWLCRSLGLPEVADPHELVNNVALTPPTPVAGIHRLD PRPLGGAMGWWSDAVLDVAVLRETRRP
Sequences:
>Translated_347_residues MPAASPQLLPTLPLVTDFATTHSGLRHAAGRFAPSPTSALHLGNLRTALAAWLLARSTGRRFVVRIEDLDRARVAAAGKI ASTQLRDLESLGLDWDGPVVRQSERLDLYADAVAGLETYPCFCTRREIAAATTAPNEADWRPYPGTCRRLTVQQRHERLT TRAPATRLASQLNTFEATDLARGCARGRVDDLVLVRNDGTPAYNLAVVVDDGLQGVDQVVRARDLWSSAPRQAQLAELLG FIPPVYAHTGLVTGPGGVRLSKSAGAAGLSDLVDSGIDHRQVVAWLCRSLGLPEVADPHELVNNVALTPPTPVAGIHRLD PRPLGGAMGWWSDAVLDVAVLRETRRP >Mature_346_residues PAASPQLLPTLPLVTDFATTHSGLRHAAGRFAPSPTSALHLGNLRTALAAWLLARSTGRRFVVRIEDLDRARVAAAGKIA STQLRDLESLGLDWDGPVVRQSERLDLYADAVAGLETYPCFCTRREIAAATTAPNEADWRPYPGTCRRLTVQQRHERLTT RAPATRLASQLNTFEATDLARGCARGRVDDLVLVRNDGTPAYNLAVVVDDGLQGVDQVVRARDLWSSAPRQAQLAELLGF IPPVYAHTGLVTGPGGVRLSKSAGAAGLSDLVDSGIDHRQVVAWLCRSLGLPEVADPHELVNNVALTPPTPVAGIHRLDP RPLGGAMGWWSDAVLDVAVLRETRRP
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily
Homologues:
Organism=Homo sapiens, GI134288884, Length=267, Percent_Identity=35.2059925093633, Blast_Score=128, Evalue=8e-30, Organism=Escherichia coli, GI226510925, Length=270, Percent_Identity=38.8888888888889, Blast_Score=148, Evalue=5e-37, Organism=Escherichia coli, GI1788743, Length=303, Percent_Identity=32.013201320132, Blast_Score=144, Evalue=1e-35, Organism=Caenorhabditis elegans, GI71993394, Length=262, Percent_Identity=30.9160305343511, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6324540, Length=267, Percent_Identity=34.4569288389513, Blast_Score=138, Evalue=1e-33, Organism=Drosophila melanogaster, GI24665321, Length=292, Percent_Identity=33.2191780821918, Blast_Score=124, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLUQ_PROAC (Q6A7Y1)
Other databases:
- EMBL: AE017283 - RefSeq: YP_056092.1 - ProteinModelPortal: Q6A7Y1 - SMR: Q6A7Y1 - GeneID: 2931565 - GenomeReviews: AE017283_GR - KEGG: pac:PPA1383 - NMPDR: fig|267747.1.peg.1369 - HOGENOM: HBG628189 - OMA: DAPSSYH - ProtClustDB: CLSK2763938 - BioCyc: PACN267747:PPA1383-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_01428 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987
Pfam domain/function: PF00749 tRNA-synt_1c
EC number: 6.1.1.17
Molecular weight: Translated: 37357; Mature: 37226
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: PS00178 AA_TRNA_LIGASE_I; PS00136 SUBTILASE_ASP
Important sites: BINDING 67-67 BINDING 203-203 BINDING 221-221 BINDING 262-262
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAASPQLLPTLPLVTDFATTHSGLRHAAGRFAPSPTSALHLGNLRTALAAWLLARSTGR CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCC RFVVRIEDLDRARVAAAGKIASTQLRDLESLGLDWDGPVVRQSERLDLYADAVAGLETYP EEEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC CFCTRREIAAATTAPNEADWRPYPGTCRRLTVQQRHERLTTRAPATRLASQLNTFEATDL CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ARGCARGRVDDLVLVRNDGTPAYNLAVVVDDGLQGVDQVVRARDLWSSAPRQAQLAELLG HHHHHCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH FIPPVYAHTGLVTGPGGVRLSKSAGAAGLSDLVDSGIDHRQVVAWLCRSLGLPEVADPHE HCCHHHHHCCEEECCCCCEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHH LVNNVALTPPTPVAGIHRLDPRPLGGAMGWWSDAVLDVAVLRETRRP HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PAASPQLLPTLPLVTDFATTHSGLRHAAGRFAPSPTSALHLGNLRTALAAWLLARSTGR CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCC RFVVRIEDLDRARVAAAGKIASTQLRDLESLGLDWDGPVVRQSERLDLYADAVAGLETYP EEEEEECCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC CFCTRREIAAATTAPNEADWRPYPGTCRRLTVQQRHERLTTRAPATRLASQLNTFEATDL CHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH ARGCARGRVDDLVLVRNDGTPAYNLAVVVDDGLQGVDQVVRARDLWSSAPRQAQLAELLG HHHHHCCCCCCEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH FIPPVYAHTGLVTGPGGVRLSKSAGAAGLSDLVDSGIDHRQVVAWLCRSLGLPEVADPHE HCCHHHHHCCEEECCCCCEEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHH LVNNVALTPPTPVAGIHRLDPRPLGGAMGWWSDAVLDVAVLRETRRP HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate; tRNA(Glu)
Specific reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu)
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA