| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
Click here to switch to the map view.
The map label for this gene is osmC [C]
Identifier: 50842066
GI number: 50842066
Start: 641010
End: 641438
Strand: Direct
Name: osmC [C]
Synonym: PPA0580
Alternate gene names: 50842066
Gene position: 641010-641438 (Clockwise)
Preceding gene: 50842062
Following gene: 50842067
Centisome position: 25.04
GC content: 64.1
Gene sequence:
>429_bases ATGATCGAGATCGAGCCCGTCTACACCACCGAGGCTATTGCTACCGGTGCCGGCCGCAATGGTCACGTCCAAAGTCCCGA CGGTCGCGTGTCTGAGGATCTGGCTGTTCCCGTCGAGATGGGTGGTAGCGGTAAGGGCACGAACCCGGAGCAGCTGTTTG CGGCTGGCTATGCCGCATGCTTCCACTCCGCCCTGCAGATGGTGGCCCGCCAGGCAAAAAAGGACCTTGGCGACTCCTCG GTGGGCGCACGGGTTTCAATCGGTCAGGCCGGGGAGGGGTTTGGCCTTGCCGTCGCCCTGGAGGTCGTTATCCCGGCTCT GCCGCACGACGAGGCCCAGCGGCTTGCCGATAAGGCCCACCAGGTGTGTCCCTACTCGAACGCCACTCGGGGCAATATCC GCGTTGACGTCACCGTCGTCGACGACTGA
Upstream 100 bases:
>100_bases CACAACAAGATTGGACACAACTTAGTTGCGCGCTATGTTTCTTATAACGCTGCACGACAGAAACGTCAGCGCACATTCGT CCAGCGAGTAAGGAGACACC
Downstream 100 bases:
>100_bases CGTCAGGTGCTCCTGGGGACGCTTCTAGGTCAGCCCTCGGGGGCATCGAGCGCTCCGGCGCCACGCGACGGATATTGCGA AAAGCGCCACCGCACGACAC
Product: stress-induced protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MIEIEPVYTTEAIATGAGRNGHVQSPDGRVSEDLAVPVEMGGSGKGTNPEQLFAAGYAACFHSALQMVARQAKKDLGDSS VGARVSIGQAGEGFGLAVALEVVIPALPHDEAQRLADKAHQVCPYSNATRGNIRVDVTVVDD
Sequences:
>Translated_142_residues MIEIEPVYTTEAIATGAGRNGHVQSPDGRVSEDLAVPVEMGGSGKGTNPEQLFAAGYAACFHSALQMVARQAKKDLGDSS VGARVSIGQAGEGFGLAVALEVVIPALPHDEAQRLADKAHQVCPYSNATRGNIRVDVTVVDD >Mature_142_residues MIEIEPVYTTEAIATGAGRNGHVQSPDGRVSEDLAVPVEMGGSGKGTNPEQLFAAGYAACFHSALQMVARQAKKDLGDSS VGARVSIGQAGEGFGLAVALEVVIPALPHDEAQRLADKAHQVCPYSNATRGNIRVDVTVVDD
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14743; Mature: 14743
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEIEPVYTTEAIATGAGRNGHVQSPDGRVSEDLAVPVEMGGSGKGTNPEQLFAAGYAAC CEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH FHSALQMVARQAKKDLGDSSVGARVSIGQAGEGFGLAVALEVVIPALPHDEAQRLADKAH HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEHEEHHHCCCCCHHHHHHHHHHH QVCPYSNATRGNIRVDVTVVDD HCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MIEIEPVYTTEAIATGAGRNGHVQSPDGRVSEDLAVPVEMGGSGKGTNPEQLFAAGYAAC CEECCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH FHSALQMVARQAKKDLGDSSVGARVSIGQAGEGFGLAVALEVVIPALPHDEAQRLADKAH HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEHEEHHHCCCCCHHHHHHHHHHH QVCPYSNATRGNIRVDVTVVDD HCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9226277 [H]