| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50842062
Identifier: 50842062
GI number: 50842062
Start: 637820
End: 638557
Strand: Direct
Name: 50842062
Synonym: PPA0576
Alternate gene names: NA
Gene position: 637820-638557 (Clockwise)
Preceding gene: 50842061
Following gene: 50842066
Centisome position: 24.91
GC content: 57.32
Gene sequence:
>738_bases TTGCACTACTCCGAGATCGCTCAGCGCATCTTGGACAGCGGTCTCCGTCAACAAACTGGCGCTACCCCCGCTGCGACGGT GGCTGCCACGATCTCCACGACCTTGCGGAAGAATGTCGTCCGCGTAGATCGAGGTGTGTACAGCTTAAGGACGCCACAGT CGGTGCCTCCCGAGGAGTCGGAGACTGAGTTGCCGGATTCCCGCGGGGTGATCCCGCCGACTGCACTTGAGGCGGGTGAG GAAAACAACGGATTTCTTAACGCTTTCGGCATGTTTTGGAGACGTGACGAAGTGGATTGGGACAAGCGCGGACAGACCCT CTTAGGGGCCCAGTTGAAGGTTGCTAAACCCGTTAACTTTTCTGGTCAGGTCGGCGTCTACATTCTTTACTCCGGTGAGA GAGTGATCTGCGTAGGCCGTATTACTGAGCCACGTTTGGGGCCCCGCCTGTGGGATCACACGCGCGATCGCCTTGCAGGT CGCTGGGACCGGTTCTCTTGGTTTGGTGTGCTAATCGCGAAAGATGACGGGACGCTCGGTAATGTGCCGTGTGGAAATTT TGCCGTCGATATGCTCGTTTCCACCATGGAAGCCCTTCTTATTGAGGGCCTAGAACCGCCACAGAATCGCCGTCGAGGTG ATGGCTTCAACGCTACGGAGTTCATTCAGGCGACGGATCCTGAGGTAGAGCGCCGCCGCGCTAAGCAGCTCCTATTCAAG CTCACCGACTCGAAGTAA
Upstream 100 bases:
>100_bases CATCTGAGATCCGTCATATCTTTGGCGTAGCCTTATTGGTATGAATAACATGCCGTAGCCAAAGGCCATCCTCAAGGTGC TGTCGGAAGCCAAGGAGCCC
Downstream 100 bases:
>100_bases TCGAACGTTCGGGCCCTTCGGAGCACTGATTTCTCGTCGCTTCATAAGCCTGGTGTGGCTAGCCCGGTACGTAGGCGTCA GTACGGGTAGTCACCCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEESETELPDSRGVIPPTALEAGE ENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNFSGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAG RWDRFSWFGVLIAKDDGTLGNVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK LTDSK
Sequences:
>Translated_245_residues MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEESETELPDSRGVIPPTALEAGE ENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNFSGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAG RWDRFSWFGVLIAKDDGTLGNVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK LTDSK >Mature_245_residues MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEESETELPDSRGVIPPTALEAGE ENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNFSGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAG RWDRFSWFGVLIAKDDGTLGNVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK LTDSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27358; Mature: 27358
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEES CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC ETELPDSRGVIPPTALEAGEENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNF CCCCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHCCCCCCHHHCCCEEECCEEEEECCCCC SGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAGRWDRFSWFGVLIAKDDGTLG CCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC NVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK CCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHEECCCCHHHHHHHHHHHHH LTDSK HCCCC >Mature Secondary Structure MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEES CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC ETELPDSRGVIPPTALEAGEENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNF CCCCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHCCCCCCHHHCCCEEECCEEEEECCCCC SGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAGRWDRFSWFGVLIAKDDGTLG CCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC NVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK CCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHEECCCCHHHHHHHHHHHHH LTDSK HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA