Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50842062

Identifier: 50842062

GI number: 50842062

Start: 637820

End: 638557

Strand: Direct

Name: 50842062

Synonym: PPA0576

Alternate gene names: NA

Gene position: 637820-638557 (Clockwise)

Preceding gene: 50842061

Following gene: 50842066

Centisome position: 24.91

GC content: 57.32

Gene sequence:

>738_bases
TTGCACTACTCCGAGATCGCTCAGCGCATCTTGGACAGCGGTCTCCGTCAACAAACTGGCGCTACCCCCGCTGCGACGGT
GGCTGCCACGATCTCCACGACCTTGCGGAAGAATGTCGTCCGCGTAGATCGAGGTGTGTACAGCTTAAGGACGCCACAGT
CGGTGCCTCCCGAGGAGTCGGAGACTGAGTTGCCGGATTCCCGCGGGGTGATCCCGCCGACTGCACTTGAGGCGGGTGAG
GAAAACAACGGATTTCTTAACGCTTTCGGCATGTTTTGGAGACGTGACGAAGTGGATTGGGACAAGCGCGGACAGACCCT
CTTAGGGGCCCAGTTGAAGGTTGCTAAACCCGTTAACTTTTCTGGTCAGGTCGGCGTCTACATTCTTTACTCCGGTGAGA
GAGTGATCTGCGTAGGCCGTATTACTGAGCCACGTTTGGGGCCCCGCCTGTGGGATCACACGCGCGATCGCCTTGCAGGT
CGCTGGGACCGGTTCTCTTGGTTTGGTGTGCTAATCGCGAAAGATGACGGGACGCTCGGTAATGTGCCGTGTGGAAATTT
TGCCGTCGATATGCTCGTTTCCACCATGGAAGCCCTTCTTATTGAGGGCCTAGAACCGCCACAGAATCGCCGTCGAGGTG
ATGGCTTCAACGCTACGGAGTTCATTCAGGCGACGGATCCTGAGGTAGAGCGCCGCCGCGCTAAGCAGCTCCTATTCAAG
CTCACCGACTCGAAGTAA

Upstream 100 bases:

>100_bases
CATCTGAGATCCGTCATATCTTTGGCGTAGCCTTATTGGTATGAATAACATGCCGTAGCCAAAGGCCATCCTCAAGGTGC
TGTCGGAAGCCAAGGAGCCC

Downstream 100 bases:

>100_bases
TCGAACGTTCGGGCCCTTCGGAGCACTGATTTCTCGTCGCTTCATAAGCCTGGTGTGGCTAGCCCGGTACGTAGGCGTCA
GTACGGGTAGTCACCCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEESETELPDSRGVIPPTALEAGE
ENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNFSGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAG
RWDRFSWFGVLIAKDDGTLGNVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK
LTDSK

Sequences:

>Translated_245_residues
MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEESETELPDSRGVIPPTALEAGE
ENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNFSGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAG
RWDRFSWFGVLIAKDDGTLGNVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK
LTDSK
>Mature_245_residues
MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEESETELPDSRGVIPPTALEAGE
ENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNFSGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAG
RWDRFSWFGVLIAKDDGTLGNVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK
LTDSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27358; Mature: 27358

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEES
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC
ETELPDSRGVIPPTALEAGEENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNF
CCCCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHCCCCCCHHHCCCEEECCEEEEECCCCC
SGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAGRWDRFSWFGVLIAKDDGTLG
CCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC
NVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHEECCCCHHHHHHHHHHHHH
LTDSK
HCCCC
>Mature Secondary Structure
MHYSEIAQRILDSGLRQQTGATPAATVAATISTTLRKNVVRVDRGVYSLRTPQSVPPEES
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCC
ETELPDSRGVIPPTALEAGEENNGFLNAFGMFWRRDEVDWDKRGQTLLGAQLKVAKPVNF
CCCCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHCCCCCCHHHCCCEEECCEEEEECCCCC
SGQVGVYILYSGERVICVGRITEPRLGPRLWDHTRDRLAGRWDRFSWFGVLIAKDDGTLG
CCCCCEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCC
NVPCGNFAVDMLVSTMEALLIEGLEPPQNRRRGDGFNATEFIQATDPEVERRRAKQLLFK
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHEECCCCHHHHHHHHHHHHH
LTDSK
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA