| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yhbO [C]
Identifier: 50842067
GI number: 50842067
Start: 641558
End: 642247
Strand: Direct
Name: yhbO [C]
Synonym: PPA0581
Alternate gene names: 50842067
Gene position: 641558-642247 (Clockwise)
Preceding gene: 50842066
Following gene: 50842068
Centisome position: 25.06
GC content: 61.59
Gene sequence:
>690_bases ATGTCTCGAATCCTCATGATTCTCACGTCCCACAACCAGCTGGGTGATACCGGCCGCAAGACGGGTTTCTGGCTAGAGGA GTTCGCCGCCCCCTATTACGTGTTCTGTGACGCCGGACACGACGTCACCCTAGCCTCGCCGCGGGGTGGGCAACCGCCGA TCGACCCGACGAGTTCGCTGCCGCAGATGCAGACCGATGCCACTCGCCGTTTCGATGTTGACGAGCAGGCCAAACGTGCC TTGGCGACCACCACCCCGTTGTCGGAGGTCGATATCGCCACGTTCGACGCGGTGTTCTACCCGGGTGGCCACGGTCCGCT GTGGGATCTGGCGGACGATCCCACCTCGCAGCAGATCATCTTGGATAGCGACGCCGTGGGGCGGCCGCTGGGTCTGGTAT GTCATGCCCCCGGTGTGTTGCACACCGTCAAAAAACACGATGGAACGCTGTTTGTTACCGATCGTTCGGTGACCGGTTTC ACCGACGGTGAGGAGGAGGCCGCCGGCCTGACTGGCGTCGTTCCCTTCCTCGTAGAGGACTCCCTGAAGCAGGCAGGCGC TCGGTACAGCAAGGGTCCTGACGGTGATAGTTACGTCGTTACGGACAAGACGCTGGTCACTGGTCAAAATCCGGCCTCGT CCGCTGCCACAGCCCAGCGGTTGCTCGACCTATTATGTGTTCGAGTCTAG
Upstream 100 bases:
>100_bases CGCTTCTAGGTCAGCCCTCGGGGGCATCGAGCGCTCCGGCGCCACGCGACGGATATTGCGAAAAGCGCCACCGCACGACA CAGCGAAAGGAACACCCTCC
Downstream 100 bases:
>100_bases ATATGTGAGTGAAAGGCCCGGAATCATTTCAGCATGGGATGAAGCGTGCGCGTAGCTTCGGGCTTGCGGAACATACAATG GTTTGTGAGAATTAGTTACT
Product: NonF-related protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfpI Family Transcriptional Regulator; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Intracellular Protease/Amidase-Like; C56 Family Peptidase; DJ-1/PfpI/ThiJ Superfamily Protein; Transcriptional Regulator; Amidotransferase; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSLPQMQTDATRRFDVDEQAKRA LATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQIILDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGF TDGEEEAAGLTGVVPFLVEDSLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV
Sequences:
>Translated_229_residues MSRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSLPQMQTDATRRFDVDEQAKRA LATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQIILDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGF TDGEEEAAGLTGVVPFLVEDSLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV >Mature_228_residues SRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSLPQMQTDATRRFDVDEQAKRAL ATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQIILDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGFT DGEEEAAGLTGVVPFLVEDSLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320742, Length=234, Percent_Identity=32.0512820512821, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24503; Mature: 24371
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSL CCEEEEEEECCCCCCCCCCCCCCCHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCC PQMQTDATRRFDVDEQAKRALATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQII CCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEE LDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGFTDGEEEAAGLTGVVPFLVED ECCCCCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHH SLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV HHHHCCCCCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSL CEEEEEEECCCCCCCCCCCCCCCHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCC PQMQTDATRRFDVDEQAKRALATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQII CCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEE LDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGFTDGEEEAAGLTGVVPFLVED ECCCCCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHH SLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV HHHHCCCCCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA