Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is yhbO [C]

Identifier: 50842067

GI number: 50842067

Start: 641558

End: 642247

Strand: Direct

Name: yhbO [C]

Synonym: PPA0581

Alternate gene names: 50842067

Gene position: 641558-642247 (Clockwise)

Preceding gene: 50842066

Following gene: 50842068

Centisome position: 25.06

GC content: 61.59

Gene sequence:

>690_bases
ATGTCTCGAATCCTCATGATTCTCACGTCCCACAACCAGCTGGGTGATACCGGCCGCAAGACGGGTTTCTGGCTAGAGGA
GTTCGCCGCCCCCTATTACGTGTTCTGTGACGCCGGACACGACGTCACCCTAGCCTCGCCGCGGGGTGGGCAACCGCCGA
TCGACCCGACGAGTTCGCTGCCGCAGATGCAGACCGATGCCACTCGCCGTTTCGATGTTGACGAGCAGGCCAAACGTGCC
TTGGCGACCACCACCCCGTTGTCGGAGGTCGATATCGCCACGTTCGACGCGGTGTTCTACCCGGGTGGCCACGGTCCGCT
GTGGGATCTGGCGGACGATCCCACCTCGCAGCAGATCATCTTGGATAGCGACGCCGTGGGGCGGCCGCTGGGTCTGGTAT
GTCATGCCCCCGGTGTGTTGCACACCGTCAAAAAACACGATGGAACGCTGTTTGTTACCGATCGTTCGGTGACCGGTTTC
ACCGACGGTGAGGAGGAGGCCGCCGGCCTGACTGGCGTCGTTCCCTTCCTCGTAGAGGACTCCCTGAAGCAGGCAGGCGC
TCGGTACAGCAAGGGTCCTGACGGTGATAGTTACGTCGTTACGGACAAGACGCTGGTCACTGGTCAAAATCCGGCCTCGT
CCGCTGCCACAGCCCAGCGGTTGCTCGACCTATTATGTGTTCGAGTCTAG

Upstream 100 bases:

>100_bases
CGCTTCTAGGTCAGCCCTCGGGGGCATCGAGCGCTCCGGCGCCACGCGACGGATATTGCGAAAAGCGCCACCGCACGACA
CAGCGAAAGGAACACCCTCC

Downstream 100 bases:

>100_bases
ATATGTGAGTGAAAGGCCCGGAATCATTTCAGCATGGGATGAAGCGTGCGCGTAGCTTCGGGCTTGCGGAACATACAATG
GTTTGTGAGAATTAGTTACT

Product: NonF-related protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; DJ-1/PfpI-Family Transcriptional Regulator; Peptidase; DJ-1/PfpI Family Transcriptional Regulator; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; Intracellular Protease/Amidase-Like; C56 Family Peptidase; DJ-1/PfpI/ThiJ Superfamily Protein; Transcriptional Regulator; Amidotransferase; Protease I; Intracellular Protease Amidase; ThiJ/PfpI Protein; Regulatory Protein; NonF Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSLPQMQTDATRRFDVDEQAKRA
LATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQIILDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGF
TDGEEEAAGLTGVVPFLVEDSLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV

Sequences:

>Translated_229_residues
MSRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSLPQMQTDATRRFDVDEQAKRA
LATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQIILDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGF
TDGEEEAAGLTGVVPFLVEDSLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV
>Mature_228_residues
SRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSLPQMQTDATRRFDVDEQAKRAL
ATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQIILDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGFT
DGEEEAAGLTGVVPFLVEDSLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=234, Percent_Identity=32.0512820512821, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24503; Mature: 24371

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSL
CCEEEEEEECCCCCCCCCCCCCCCHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCC
PQMQTDATRRFDVDEQAKRALATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQII
CCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEE
LDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGFTDGEEEAAGLTGVVPFLVED
ECCCCCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHH
SLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV
HHHHCCCCCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRILMILTSHNQLGDTGRKTGFWLEEFAAPYYVFCDAGHDVTLASPRGGQPPIDPTSSL
CEEEEEEECCCCCCCCCCCCCCCHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCC
PQMQTDATRRFDVDEQAKRALATTTPLSEVDIATFDAVFYPGGHGPLWDLADDPTSQQII
CCCCCCCHHCCCCCHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEE
LDSDAVGRPLGLVCHAPGVLHTVKKHDGTLFVTDRSVTGFTDGEEEAAGLTGVVPFLVED
ECCCCCCCCEEEEECCCCHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCHHHHHHHHHH
SLKQAGARYSKGPDGDSYVVTDKTLVTGQNPASSAATAQRLLDLLCVRV
HHHHCCCCCCCCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA