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The map label for this gene is degT [H]

Identifier: 50841624

GI number: 50841624

Start: 161627

End: 162739

Strand: Direct

Name: degT [H]

Synonym: PPA0135

Alternate gene names: 50841624

Gene position: 161627-162739 (Clockwise)

Preceding gene: 50841623

Following gene: 50841625

Centisome position: 6.31

GC content: 62.08

Gene sequence:

>1113_bases
GTGACCGCCCAGTTCATTCCTCCCGCTAAGCCGATCCTCGGCGATGACGAGCGTAAGGCCGTCGACGAGGTTATTGCCTC
CGGCATGGTCGCCCAGGGCCCCCAGGTCCACGCCTTCGAGGACGAGTTCTCCTCCCAGGTCGTCGACGGGGTTCACTGCG
TCGCCGTCAACTCGGGAACCTCGGCCCTCCACATTGGCCTGCTGGCCTCTGGCATCGGTGAGGGCGACGAGGTCATCGTC
CCTTCCTTCACTTTCGCCGCTACCGGCAACTCGGTAGCCCTGTCCGGCGCCAAGCCGGTGTTCGCTGACGTCGACCCGGT
CACGTTTACCCTCGACCCGGCTTCCATCGAGGCCTCTATTACCGACAAGACCGCCGCGATCATGCCGGTGCACCTCTATG
GTCTCCCGGCTAACATGGCCGAAATTGTCGCGATCGCCACAAAACACGGTCTCAAGATCTTCGAGGATTGTGCCCAAGCC
CACGCTGCCAGCATCGACGGCAAGCATGTCGGTACTTTTGGCACCTTTGGAGCTTTCTCCTTCTACCCGACGAAGAACAT
GACCTCGGGCGAGGGTGGCATGATCACCACCTCTGACCCGGAAATCGCCCGTAAGGCTGCCATGCTCCGCAACCAGGGCA
TGGAGAAGCGTTACGCCAACGAGTACGTTGGTCTCAACAACCGCATGACTGACATCCACGCTTCCATCGGACGGGTGCAG
TTGACCAAGCTGGCCGGCTGGACCAAGACCCGCCAGGAGAACGCGGCGTTCCTGTCGTCCAACATCACCGAGGCCATCAC
CCCCGCCGTGCCGGAGGGTTATGTGCACGTGTACCACCAGTACACGATTCGTCTTGAGGGAGCTACTGGTGAGGAGCGTG
ACCGTTTCGTCACCGCTCTCAAAGAGGAACACCAGGTTGGCTCGGGTGTCTACTACCCGATTCCGAACCACCGGCTGCCG
TCGCTGGCCCCTTACGCCCCGGGCCTGGAGCTTCCGAACACCGAGAAGGTTGCCGCCGAGTGTGTCTCACTGCCGGTCCA
TCCCTCGCTGTCCCAGGCTGACCGTGAGCGCATCGTTGCCGCTGTCAATACCTGCGCGAAAGCAGGTGCCTGA

Upstream 100 bases:

>100_bases
AGGGCGAGCAGGCCTAAGGCCGTCGTCCCCCAATACCCCCTCGTGGGTGCTACGGCGCCCACAAACCGGACCTTCCGTCC
GAATAGTTAGGAGCTTTCAC

Downstream 100 bases:

>100_bases
TGGCGAATCTGCGCGCCGGCATGGTCGGCATCGGTTCGATGGGCAAGAACCACGTCCGCAACCTGCGCGCCATCGACGGC
GTCGATCTGGTCGCGATCGC

Product: aspartate aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MTAQFIPPAKPILGDDERKAVDEVIASGMVAQGPQVHAFEDEFSSQVVDGVHCVAVNSGTSALHIGLLASGIGEGDEVIV
PSFTFAATGNSVALSGAKPVFADVDPVTFTLDPASIEASITDKTAAIMPVHLYGLPANMAEIVAIATKHGLKIFEDCAQA
HAASIDGKHVGTFGTFGAFSFYPTKNMTSGEGGMITTSDPEIARKAAMLRNQGMEKRYANEYVGLNNRMTDIHASIGRVQ
LTKLAGWTKTRQENAAFLSSNITEAITPAVPEGYVHVYHQYTIRLEGATGEERDRFVTALKEEHQVGSGVYYPIPNHRLP
SLAPYAPGLELPNTEKVAAECVSLPVHPSLSQADRERIVAAVNTCAKAGA

Sequences:

>Translated_370_residues
MTAQFIPPAKPILGDDERKAVDEVIASGMVAQGPQVHAFEDEFSSQVVDGVHCVAVNSGTSALHIGLLASGIGEGDEVIV
PSFTFAATGNSVALSGAKPVFADVDPVTFTLDPASIEASITDKTAAIMPVHLYGLPANMAEIVAIATKHGLKIFEDCAQA
HAASIDGKHVGTFGTFGAFSFYPTKNMTSGEGGMITTSDPEIARKAAMLRNQGMEKRYANEYVGLNNRMTDIHASIGRVQ
LTKLAGWTKTRQENAAFLSSNITEAITPAVPEGYVHVYHQYTIRLEGATGEERDRFVTALKEEHQVGSGVYYPIPNHRLP
SLAPYAPGLELPNTEKVAAECVSLPVHPSLSQADRERIVAAVNTCAKAGA
>Mature_369_residues
TAQFIPPAKPILGDDERKAVDEVIASGMVAQGPQVHAFEDEFSSQVVDGVHCVAVNSGTSALHIGLLASGIGEGDEVIVP
SFTFAATGNSVALSGAKPVFADVDPVTFTLDPASIEASITDKTAAIMPVHLYGLPANMAEIVAIATKHGLKIFEDCAQAH
AASIDGKHVGTFGTFGAFSFYPTKNMTSGEGGMITTSDPEIARKAAMLRNQGMEKRYANEYVGLNNRMTDIHASIGRVQL
TKLAGWTKTRQENAAFLSSNITEAITPAVPEGYVHVYHQYTIRLEGATGEERDRFVTALKEEHQVGSGVYYPIPNHRLPS
LAPYAPGLELPNTEKVAAECVSLPVHPSLSQADRERIVAAVNTCAKAGA

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=382, Percent_Identity=35.8638743455497, Blast_Score=220, Evalue=9e-59,
Organism=Escherichia coli, GI2367285, Length=324, Percent_Identity=32.7160493827161, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 39260; Mature: 39129

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQFIPPAKPILGDDERKAVDEVIASGMVAQGPQVHAFEDEFSSQVVDGVHCVAVNSGT
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCEEEEEEECCC
SALHIGLLASGIGEGDEVIVPSFTFAATGNSVALSGAKPVFADVDPVTFTLDPASIEASI
CEEEEEHHHHCCCCCCEEEECCEEEEECCCEEEECCCCCCEECCCCEEEEECCCCEEEEE
TDKTAAIMPVHLYGLPANMAEIVAIATKHGLKIFEDCAQAHAASIDGKHVGTFGTFGAFS
CCCCEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
FYPTKNMTSGEGGMITTSDPEIARKAAMLRNQGMEKRYANEYVGLNNRMTDIHASIGRVQ
EECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCEEE
LTKLAGWTKTRQENAAFLSSNITEAITPAVPEGYVHVYHQYTIRLEGATGEERDRFVTAL
EEHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHH
KEEHQVGSGVYYPIPNHRLPSLAPYAPGLELPNTEKVAAECVSLPVHPSLSQADRERIVA
HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
AVNTCAKAGA
HHHHHHHCCC
>Mature Secondary Structure 
TAQFIPPAKPILGDDERKAVDEVIASGMVAQGPQVHAFEDEFSSQVVDGVHCVAVNSGT
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHCCEEEEEEECCC
SALHIGLLASGIGEGDEVIVPSFTFAATGNSVALSGAKPVFADVDPVTFTLDPASIEASI
CEEEEEHHHHCCCCCCEEEECCEEEEECCCEEEECCCCCCEECCCCEEEEECCCCEEEEE
TDKTAAIMPVHLYGLPANMAEIVAIATKHGLKIFEDCAQAHAASIDGKHVGTFGTFGAFS
CCCCEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
FYPTKNMTSGEGGMITTSDPEIARKAAMLRNQGMEKRYANEYVGLNNRMTDIHASIGRVQ
EECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHCCEEE
LTKLAGWTKTRQENAAFLSSNITEAITPAVPEGYVHVYHQYTIRLEGATGEERDRFVTAL
EEHHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHH
KEEHQVGSGVYYPIPNHRLPSLAPYAPGLELPNTEKVAAECVSLPVHPSLSQADRERIVA
HHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
AVNTCAKAGA
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]