| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is leuA [H]
Identifier: 161621797
GI number: 161621797
Start: 1022078
End: 1023781
Strand: Direct
Name: leuA [H]
Synonym: PPA0941
Alternate gene names: 161621797
Gene position: 1022078-1023781 (Clockwise)
Preceding gene: 50842423
Following gene: 50842428
Centisome position: 39.92
GC content: 59.1
Gene sequence:
>1704_bases ATGCCCAGCGGGCGTTATAAACCTTTCGTTCCGCACACGTTGCCGGACCGTACCTGGCCAGACAAGACCTTGGACCATGC TCCGCGGTGGCTGTCCACTGATTTGCGTGATGGCAACCAGGCGCTTGTTGACCCCATGACTCCGGCTCGCAAGATGCGGA TGTTCGAACTTCTTGTTGGGATGGGGTACAAGGAGATTGAAATTGGCTTCCCCTCAGCTTCTCAAACGGATTTCGACTTC GTTCGGCAGGTTATTGAGTCCGGCATTCTCCCTGACGACGTCACTATTTCGGTGCTGACCCAGGCCCGTGAGGATCTCAT CGAGCGCACCATGCGGAGCTTAGTCGGCGCTCACCGTGCCACTGTCCACATGTATAATGCAGTTGCCGAACTCTTCCGAC GCGTTGTCTTCAACATCGACGAAAAGCAGTGCATTGACCTGGCGCACCGTGGTACTGAGTGGGTCGTCAGGTACGCCGAC AAGTACCTCGGCGACGTTGAGTTCGGCTACGAGTACTCTCCGGAGATGTTTAGCCAGACCCGCACGGACTTCGCTATCGA CGTCTGTCACTCCGTGATGGACGTGTGGCAGCCGGGGCCAGGCCGTGAGATTATCCTTAATCTGCCGGCTACCGTCGAGA TGAGTACTCCGAACACCTACGCCGACCAAATCGAGTACTTCTGCCGCAATATCCGTGATCGTGAGCACGTGTGCGTCTCT TTGCACCCGCACAATGATCGTGGCACGGCGATCGCGGCCGCCGAGTTCGCGCAGATGGCGGGCGCCGATCGCGTCGAGGG CTGTCTCTTTGGCCACGGCGAGCGCACCGGCAACGTTGATCTCGTCACCTTAGGTATGAATCTTGTCAGCCAGGGAGTTG ACGCGGGTATCGACTTCTCTGACATGCCAAAAATCCGCCGCACCGTCGAGTACTGCACTGGACTACCGGTGCCGGCACGC CAGCCCTACGCCGGCGACCTCGTCTTCACAGCCTTTTCGGGCTCGCACCAAGACGCTATCAAGAAAGGCCTGGAGGACCT CGAACGCCAGGCCCAGGAGCAGGGCATCGGTATCCACGAGGTTGACTGGCAGGCCCCCTACCTGACCATCGACCCACACG ACGTCGGACGCACCTACGAGGCTGTCATTCGCGTCAACAGCCAGTCCGGTAAGGGCGGCATGGCCTACCTCCTGAAGACC GAGCACCAAGTCGACCTGCCGCGTCGTCTGCAGATCGAGTTCTCCCGTGCAGTGCAGAATTACACCGATGACCAAGCCCG CGAGATCAGCCACGACGAGATCTGGGATCTGTTTAACCGCGAGTATCTGCAAATGCCTGGCATCGAGCTGGTGAGCCGCA CGACGTCCACCGAAACCGGTACCTATCAGCTCACCGCCAACCTTCGGATTAATGGGGCGGACACTCAGATCCGTGGTGAG GGTAACGGTGCGATGTCGGCTTTCATCGACGCACTGGTCTCCCTCGACATCGTTGTCCACGTGCTCGACTACTCCGAGCA CGCCATGACAGCGGGTGGTACTGCGAGGGCCGCCGCGTATGTCGAGTGTGAAATTGGGGACGGCGAGACCTCACAAATTC TATGGGGAGTCGGCATTGACCCTGATATCACCCAGGCTTCCCTGAAGGCGGTCGTCAACGCGGTAAACCGCTCCCGTCGG CAAACCTTGGATAGGGAGTCATGA
Upstream 100 bases:
>100_bases GGCGGCCTCCTTGCTGCGGGTGATCGGGCTGCCCTACACATCACACACGGGAGACACCATGACGCACATTCAGCCCCGTC CCTGCCAGCTGACTAGCCCG
Downstream 100 bases:
>100_bases CGCCGTGATCATGGGGTGGGGTTGACCTCATTGGGGACGGCCCCACCAAATCTCCGGTCCCGCTTGGCGTATTCCATCAC TGCGGCCCAGAGGTCGCGGC
Product: 2-isopropylmalate synthase
Products: NA
Alternate protein names: Alpha-IPM synthase; Alpha-isopropylmalate synthase [H]
Number of amino acids: Translated: 567; Mature: 566
Protein sequence:
>567_residues MPSGRYKPFVPHTLPDRTWPDKTLDHAPRWLSTDLRDGNQALVDPMTPARKMRMFELLVGMGYKEIEIGFPSASQTDFDF VRQVIESGILPDDVTISVLTQAREDLIERTMRSLVGAHRATVHMYNAVAELFRRVVFNIDEKQCIDLAHRGTEWVVRYAD KYLGDVEFGYEYSPEMFSQTRTDFAIDVCHSVMDVWQPGPGREIILNLPATVEMSTPNTYADQIEYFCRNIRDREHVCVS LHPHNDRGTAIAAAEFAQMAGADRVEGCLFGHGERTGNVDLVTLGMNLVSQGVDAGIDFSDMPKIRRTVEYCTGLPVPAR QPYAGDLVFTAFSGSHQDAIKKGLEDLERQAQEQGIGIHEVDWQAPYLTIDPHDVGRTYEAVIRVNSQSGKGGMAYLLKT EHQVDLPRRLQIEFSRAVQNYTDDQAREISHDEIWDLFNREYLQMPGIELVSRTTSTETGTYQLTANLRINGADTQIRGE GNGAMSAFIDALVSLDIVVHVLDYSEHAMTAGGTARAAAYVECEIGDGETSQILWGVGIDPDITQASLKAVVNAVNRSRR QTLDRES
Sequences:
>Translated_567_residues MPSGRYKPFVPHTLPDRTWPDKTLDHAPRWLSTDLRDGNQALVDPMTPARKMRMFELLVGMGYKEIEIGFPSASQTDFDF VRQVIESGILPDDVTISVLTQAREDLIERTMRSLVGAHRATVHMYNAVAELFRRVVFNIDEKQCIDLAHRGTEWVVRYAD KYLGDVEFGYEYSPEMFSQTRTDFAIDVCHSVMDVWQPGPGREIILNLPATVEMSTPNTYADQIEYFCRNIRDREHVCVS LHPHNDRGTAIAAAEFAQMAGADRVEGCLFGHGERTGNVDLVTLGMNLVSQGVDAGIDFSDMPKIRRTVEYCTGLPVPAR QPYAGDLVFTAFSGSHQDAIKKGLEDLERQAQEQGIGIHEVDWQAPYLTIDPHDVGRTYEAVIRVNSQSGKGGMAYLLKT EHQVDLPRRLQIEFSRAVQNYTDDQAREISHDEIWDLFNREYLQMPGIELVSRTTSTETGTYQLTANLRINGADTQIRGE GNGAMSAFIDALVSLDIVVHVLDYSEHAMTAGGTARAAAYVECEIGDGETSQILWGVGIDPDITQASLKAVVNAVNRSRR QTLDRES >Mature_566_residues PSGRYKPFVPHTLPDRTWPDKTLDHAPRWLSTDLRDGNQALVDPMTPARKMRMFELLVGMGYKEIEIGFPSASQTDFDFV RQVIESGILPDDVTISVLTQAREDLIERTMRSLVGAHRATVHMYNAVAELFRRVVFNIDEKQCIDLAHRGTEWVVRYADK YLGDVEFGYEYSPEMFSQTRTDFAIDVCHSVMDVWQPGPGREIILNLPATVEMSTPNTYADQIEYFCRNIRDREHVCVSL HPHNDRGTAIAAAEFAQMAGADRVEGCLFGHGERTGNVDLVTLGMNLVSQGVDAGIDFSDMPKIRRTVEYCTGLPVPARQ PYAGDLVFTAFSGSHQDAIKKGLEDLERQAQEQGIGIHEVDWQAPYLTIDPHDVGRTYEAVIRVNSQSGKGGMAYLLKTE HQVDLPRRLQIEFSRAVQNYTDDQAREISHDEIWDLFNREYLQMPGIELVSRTTSTETGTYQLTANLRINGADTQIRGEG NGAMSAFIDALVSLDIVVHVLDYSEHAMTAGGTARAAAYVECEIGDGETSQILWGVGIDPDITQASLKAVVNAVNRSRRQ TLDRES
Specific function: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) [H]
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786261, Length=540, Percent_Identity=23.1481481481481, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6324225, Length=567, Percent_Identity=47.9717813051146, Blast_Score=543, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6324682, Length=569, Percent_Identity=47.2759226713532, Blast_Score=538, Evalue=1e-153,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013709 - InterPro: IPR002034 - InterPro: IPR013785 - InterPro: IPR005668 - InterPro: IPR000891 [H]
Pfam domain/function: PF00682 HMGL-like; PF08502 LeuA_dimer [H]
EC number: =2.3.3.13 [H]
Molecular weight: Translated: 63438; Mature: 63307
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS00086 CYTOCHROME_P450 ; PS00815 AIPM_HOMOCIT_SYNTH_1 ; PS00816 AIPM_HOMOCIT_SYNTH_2 ; PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGRYKPFVPHTLPDRTWPDKTLDHAPRWLSTDLRDGNQALVDPMTPARKMRMFELLVG CCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHH MGYKEIEIGFPSASQTDFDFVRQVIESGILPDDVTISVLTQAREDLIERTMRSLVGAHRA CCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TVHMYNAVAELFRRVVFNIDEKQCIDLAHRGTEWVVRYADKYLGDVEFGYEYSPEMFSQT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RTDFAIDVCHSVMDVWQPGPGREIILNLPATVEMSTPNTYADQIEYFCRNIRDREHVCVS HHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEE LHPHNDRGTAIAAAEFAQMAGADRVEGCLFGHGERTGNVDLVTLGMNLVSQGVDAGIDFS EECCCCCCCCHHHHHHHHHCCCCHHCCEEEECCCCCCCEEEEEECHHHHHCCCCCCCCHH DMPKIRRTVEYCTGLPVPARQPYAGDLVFTAFSGSHQDAIKKGLEDLERQAQEQGIGIHE CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEE VDWQAPYLTIDPHDVGRTYEAVIRVNSQSGKGGMAYLLKTEHQVDLPRRLQIEFSRAVQN ECCCCCEEEECCHHHCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC YTDDQAREISHDEIWDLFNREYLQMPGIELVSRTTSTETGTYQLTANLRINGADTQIRGE CCCHHHHHCCHHHHHHHHCHHHHCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCEEEEC GNGAMSAFIDALVSLDIVVHVLDYSEHAMTAGGTARAAAYVECEIGDGETSQILWGVGID CCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEEECCCCCCCEEEEECCCC PDITQASLKAVVNAVNRSRRQTLDRES CCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PSGRYKPFVPHTLPDRTWPDKTLDHAPRWLSTDLRDGNQALVDPMTPARKMRMFELLVG CCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHH MGYKEIEIGFPSASQTDFDFVRQVIESGILPDDVTISVLTQAREDLIERTMRSLVGAHRA CCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TVHMYNAVAELFRRVVFNIDEKQCIDLAHRGTEWVVRYADKYLGDVEFGYEYSPEMFSQT HHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH RTDFAIDVCHSVMDVWQPGPGREIILNLPATVEMSTPNTYADQIEYFCRNIRDREHVCVS HHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEE LHPHNDRGTAIAAAEFAQMAGADRVEGCLFGHGERTGNVDLVTLGMNLVSQGVDAGIDFS EECCCCCCCCHHHHHHHHHCCCCHHCCEEEECCCCCCCEEEEEECHHHHHCCCCCCCCHH DMPKIRRTVEYCTGLPVPARQPYAGDLVFTAFSGSHQDAIKKGLEDLERQAQEQGIGIHE CCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEE VDWQAPYLTIDPHDVGRTYEAVIRVNSQSGKGGMAYLLKTEHQVDLPRRLQIEFSRAVQN ECCCCCEEEECCHHHCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHC YTDDQAREISHDEIWDLFNREYLQMPGIELVSRTTSTETGTYQLTANLRINGADTQIRGE CCCHHHHHCCHHHHHHHHCHHHHCCCCHHHHHCCCCCCCCEEEEEEEEEEECCCCEEEEC GNGAMSAFIDALVSLDIVVHVLDYSEHAMTAGGTARAAAYVECEIGDGETSQILWGVGID CCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCEEEEEEEECCCCCCCEEEEECCCC PDITQASLKAVVNAVNRSRRQTLDRES CCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA