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The map label for this gene is recO

Identifier: 50842428

GI number: 50842428

Start: 1025484

End: 1026224

Strand: Direct

Name: recO

Synonym: PPA0944

Alternate gene names: 50842428

Gene position: 1025484-1026224 (Clockwise)

Preceding gene: 161621797

Following gene: 50842431

Centisome position: 40.05

GC content: 61.27

Gene sequence:

>741_bases
ATGCCCACCTACCGTGACCAAGCCGTCGTTCTGCGCACGCACAAGCTAGGTGAGGCTGATCGGATCGTGTCGATGTTGTC
GCGTGAGCACGGCAAGATTCGGGCGGTGGCACGAGGGATTCGACGCACCTCCAGCAAATTTGGTGCCCGTCTGGATCCGT
TCAATCTGGTTGACCTGCAGTTGGTTCAGGGACGCAATCTCGACGTCGTCGCCCAGGTGGAGTGTTTGCATCCTTACTCG
GCGCCGCTGCGTCAGGACTATTCTCTGTTCACCGCGGCTGAGGTCATGGTGGAGGCTGCCGACCATCTGGTGCCGGTGGA
CCGTGAACCGGCCCCGGCACAATACCGATTGTTGGCAGGAGCTCTGCGGGTGCTCGGCCAGGGGACGACGGACGGTCCAC
GGCCACCCGAGATGGTGCTGGACTCTTACCTGTTGCGCTCTCTTTCAGCATCCGGATATGCCCCGGATCTGGTCGACTGT
GTCCGGTGTGGGACACCTGGGCCGCACCAGGGTTTTTCGCCCAGTTTGGGGGGCGTGGTGTGTATTAATTGTCAGCCGCC
CGGAACTCCTCATCCGCACGAGGAGACGATTTCGTACCTGCGGGCTTTGCTGGTGGGGGACTGGACTGCGACGCGTGATG
TTGCGTGGTCGAGGGTTCGGGAGGGGTCCGGACTGGTGGCAGCATTTGTGTCTTGGCATATGGATCGTGGTTTGCGGTCA
ATGCCCCTTCTGGAGCGTTGA

Upstream 100 bases:

>100_bases
CAACGGTAGTCGACCTGCGATGAACACCTCCTACCCTCTCACAGCGATTCTGTGCAGAGCATGTTTCGGCTGCACGCCAT
ACGGGGAGACAATAGGTGTC

Downstream 100 bases:

>100_bases
TCGCAAATCAGTTGCACTACGAGCGGCCTTCGGCATACGGAGCTCAGCCCTGATTCGTCTTTTCGGTTGGCGTGGCGCGT
CAATTGTCGTTCCCGGGTCA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MPTYRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQGRNLDVVAQVECLHPYS
APLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALRVLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDC
VRCGTPGPHQGFSPSLGGVVCINCQPPGTPHPHEETISYLRALLVGDWTATRDVAWSRVREGSGLVAAFVSWHMDRGLRS
MPLLER

Sequences:

>Translated_246_residues
MPTYRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQGRNLDVVAQVECLHPYS
APLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALRVLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDC
VRCGTPGPHQGFSPSLGGVVCINCQPPGTPHPHEETISYLRALLVGDWTATRDVAWSRVREGSGLVAAFVSWHMDRGLRS
MPLLER
>Mature_245_residues
PTYRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQLVQGRNLDVVAQVECLHPYSA
PLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAGALRVLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCV
RCGTPGPHQGFSPSLGGVVCINCQPPGTPHPHEETISYLRALLVGDWTATRDVAWSRVREGSGLVAAFVSWHMDRGLRSM
PLLER

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_PROAC (Q6A969)

Other databases:

- EMBL:   AE017283
- RefSeq:   YP_055655.1
- ProteinModelPortal:   Q6A969
- SMR:   Q6A969
- GeneID:   2931485
- GenomeReviews:   AE017283_GR
- KEGG:   pac:PPA0944
- NMPDR:   fig|267747.1.peg.932
- HOGENOM:   HBG634481
- OMA:   WHLERGL
- ProtClustDB:   PRK00085
- BioCyc:   PACN267747:PPA0944-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26999; Mature: 26868

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQ
CCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
LVQGRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAG
EECCCCCCEEEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
ALRVLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGGVV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEE
CINCQPPGTPHPHEETISYLRALLVGDWTATRDVAWSRVREGSGLVAAFVSWHMDRGLRS
EEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
MPLLER
CCCCCC
>Mature Secondary Structure 
PTYRDQAVVLRTHKLGEADRIVSMLSREHGKIRAVARGIRRTSSKFGARLDPFNLVDLQ
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
LVQGRNLDVVAQVECLHPYSAPLRQDYSLFTAAEVMVEAADHLVPVDREPAPAQYRLLAG
EECCCCCCEEEEEEECCCCCCCHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
ALRVLGQGTTDGPRPPEMVLDSYLLRSLSASGYAPDLVDCVRCGTPGPHQGFSPSLGGVV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCEE
CINCQPPGTPHPHEETISYLRALLVGDWTATRDVAWSRVREGSGLVAAFVSWHMDRGLRS
EEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
MPLLER
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA