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The map label for this gene is 50086439

Identifier: 50086439

GI number: 50086439

Start: 3404219

End: 3404926

Strand: Reverse

Name: 50086439

Synonym: ACIAD3478

Alternate gene names: NA

Gene position: 3404926-3404219 (Counterclockwise)

Preceding gene: 50086440

Following gene: 50086436

Centisome position: 94.62

GC content: 46.47

Gene sequence:

>708_bases
ATGAATATTGTATTGCTTGAACCCAAAGATACCGCGCAAGCTGAATGGCGCATTCATTCAGCACGTCAGCTGAGTCATCT
ACATAAACAACTCAATATTCAAGTGGACGATACACTTAAAGTGGGGATTCGCAATGGGAAACGTTATCTAACCCGTATTG
TGGCAATTGAAGAGCAAGAGATTCGGGTGACCCCGATACAGCAGGAGGCCTGTCCAGCCAAATTACCTGTAACGCTTATC
GTGGCAATGCCACGTCCCAAAGTATTACGCCGTCTGATCATGGACAGTGTGACTTTAGGGGTAGAGCGCATTTGTCTAAC
TCATAGTTATCGGGTGGATAAAAGCTACTGGCAGACACCTTTTTTGCAGCAGCTCGACGACTATATTACGCTGGGGCTTG
AGCAAGCTGGCGACACGATCGTGCCTGATATCCAGCTTTACAAGCGTTTTAAGCCGTTTGTGGAAGATGTGTTGCCAAGT
CTAATTGCACCTTTGCGTCCTGCTTTTGTGGCACATCCTTATGCAGAAACCGCCATGCCACATGCAATTGAGCATCCTTG
TAGCATCATCATCGGGCCCGAAGGTGGTTTTATCCCTTATGAAGTCGATTTACTGATTAAAAACGGCTGCCAGGCTTATC
ACTTGGGCAGCCGGATTTTAAGAACTGAAACAGCCGTTTCTTATCTATTGGGGCGACTATTTGTTTGA

Upstream 100 bases:

>100_bases
CAAACAGTGCTGATCAGATAGTCGATCATGCGCAGTCCATTTTGCAACGTAACAAAGGCTCGTTAGCACGACATATTCAT
GTATTGGATCAATATTTATC

Downstream 100 bases:

>100_bases
CGTATCCTGAGATTGAGGCGCTGTTAAAACATCAGGCGTACTTTGATGGACTTTTAGTTCCTGAATTGGATACGGAATAT
TAATTCTTTGTGCATTAAAG

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: RNA Methyltransferase RsmE Family; RNA Methyltransferase Family Protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQEIRVTPIQQEACPAKLPVTLI
VAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTPFLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPS
LIAPLRPAFVAHPYAETAMPHAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV

Sequences:

>Translated_235_residues
MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQEIRVTPIQQEACPAKLPVTLI
VAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTPFLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPS
LIAPLRPAFVAHPYAETAMPHAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV
>Mature_235_residues
MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQEIRVTPIQQEACPAKLPVTLI
VAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTPFLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPS
LIAPLRPAFVAHPYAETAMPHAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV

Specific function: Unknown

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26710; Mature: 26710

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCCHHHHHHHHHCCCCC
IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP
EEEECCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCH
FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCC
HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV
HHHCCCCEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEECCEEEEECCCCHHHHHHHHHCCCCC
IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP
EEEECCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCH
FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHCCC
HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV
HHHCCCCEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA