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The map label for this gene is 50086283

Identifier: 50086283

GI number: 50086283

Start: 3204103

End: 3205662

Strand: Reverse

Name: 50086283

Synonym: ACIAD3297

Alternate gene names: NA

Gene position: 3205662-3204103 (Counterclockwise)

Preceding gene: 50086284

Following gene: 50086279

Centisome position: 89.08

GC content: 40.64

Gene sequence:

>1560_bases
TTGCTGGAGATCATGTTGCTAGAGCAAATACAAAAAGTCAGTCATGAACTCATCATTGGGCTAGTGGGCGCTGTCGGAAG
TCGTTTAAATGTCTTAACCAGTACATTGATGGATTTGTTACACAACGAATTTGCTTATGATGTCGAAGTAATCACGATTT
CCAAAGATATTCTGGCTCGATACATTGAGCAGTCATCTACGCCGATGGATGCCTTTGAACGTATTTATCGTTATATGGAC
AAAGGCAATGAATTAAGACGAGAGCACGATACCGACTTTCTTGCACTTGAGGTGGCAAGGCTGATTGCAAAACGTCGTCA
AGACTGGCAGGAAGCACATCCAGCGCAAGATGCAAATCAAAGACGTGTTGCCTTCATTATCGACTCTTTAAAACATGAAT
CAGAAGTTCAGGCATTACGACAAATTTATAGTACGGGTTTTTTCCAGTTATCGTTATATGAGTCGAAAAAAGCACGTGAA
AATACCTTGATTCATGATTATGCCATTCGTCCAGAAAGCGCCAAAATCCTGATTGAACGTGATGAAGGTGAGGCCAATGA
CTATGGGCAACATACCAGTGAAGCCTTTCATCTTGCAGATTATTTTTTAAAATTTGATCAGCATTATTCTGAGCAATCTC
TTGGTTCGCAGCAAGAATTACGAGCATCGTGTTTTCGCTTCTTAAGAATTCTGTTTGCAGATCCTTACATTACTCCCACG
TTTAATGAATTTGCGACGTATATGTCCTTTACCGCAAGTGTGCGCTCTGCAGATTTATCGCGACAAGTGGGTGCAGTCAT
TGCACGTAATAATACTATTTTGGCAATTGGCTCAAATGATGTGCCCAAGTTTCAGGGGGGAACATATTGGCCGTATTTCG
ATGAAAACACAGGAGAGGTCAAAGATCTGGAGTCTGGGCGTGATTACATGCGTGGATTTGATGCAAATACCATCGAGAAA
AATAAAATCATTGATGACTTATTTCAGCAATTGGCCAATGCGATTGATCAATCTGTCGATGCCGAGCGTACCACGCCTTT
GAAGCTCCAGATTCATCAGATTTTAAAAGAAAGCAAAATTAAAAAAATTACCGAATATGGTCGGGTGGTACATGCAGAAA
TGGATGCATTGCTCAGTTGTAGCCGGAGCAATATTTCTACTCAGGGTGCGACTTTATTTGTGACGACTTTTCCGTGTCAT
AACTGTGCCAAGCATATTATATCGGCAGGGATTGAAAAGGTGGTATTTGTAGAGCCTTATCCCAAGAGTAAAGCCTTAAT
GATGCATGAAGATTCAATTACCCAGAAATGGGAAGGGCAAGAATATACCGAGCAAAACAAACTAATTTTTGAGCCTTTTG
TGGGAGTTGGAGCGCGTAGTTTTGTCAATTTGTTTTCCATGTCTTTAGGCAGTGGACGCAAATTAAAACGCAAAAGCAAA
GAGGGTTATGTTTTGTCTTGGAATGCGAAAACAGCCGAGCTTAGACTACCGATGTATTATTTATCTCATCGTGAGTTAGA
GCAGGAAATCGAACAATCGATGTTAAAGAAATCCTTTTAA

Upstream 100 bases:

>100_bases
TCCAAATGATCGCGTTATTAATACAACTCATATTTAAATAACCCTGAGCAACATATTTTTCTAAATAAAACCGTTAGAAT
ACATTGATATCTCAATTGAT

Downstream 100 bases:

>100_bases
TCTGATGATTTGATTGAGTTGCATTGAAAGATACACCATCAGACTGTTCAGAGCAGGGAATGAAGATCTGCCCGGAACAA
TAGTGAGCAGTACGATTAGG

Product: cytidine / deoxycytidylate deaminase family protein

Products: uridine; NH3

Alternate protein names: Cytidine/Deoxycytidylate Deaminase; Cytidine Deaminase; Deoxycytidylate Deaminase; DCMP Deaminase; Cytidine / Deoxycytidylate Deaminase Family Protein; ComE Operon; Deoxycytidylate Deaminase-Related Protein; CMP/DCMP Deaminase; Deoxycytidylate Deaminase-Like Protein

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MLEIMLLEQIQKVSHELIIGLVGAVGSRLNVLTSTLMDLLHNEFAYDVEVITISKDILARYIEQSSTPMDAFERIYRYMD
KGNELRREHDTDFLALEVARLIAKRRQDWQEAHPAQDANQRRVAFIIDSLKHESEVQALRQIYSTGFFQLSLYESKKARE
NTLIHDYAIRPESAKILIERDEGEANDYGQHTSEAFHLADYFLKFDQHYSEQSLGSQQELRASCFRFLRILFADPYITPT
FNEFATYMSFTASVRSADLSRQVGAVIARNNTILAIGSNDVPKFQGGTYWPYFDENTGEVKDLESGRDYMRGFDANTIEK
NKIIDDLFQQLANAIDQSVDAERTTPLKLQIHQILKESKIKKITEYGRVVHAEMDALLSCSRSNISTQGATLFVTTFPCH
NCAKHIISAGIEKVVFVEPYPKSKALMMHEDSITQKWEGQEYTEQNKLIFEPFVGVGARSFVNLFSMSLGSGRKLKRKSK
EGYVLSWNAKTAELRLPMYYLSHRELEQEIEQSMLKKSF

Sequences:

>Translated_519_residues
MLEIMLLEQIQKVSHELIIGLVGAVGSRLNVLTSTLMDLLHNEFAYDVEVITISKDILARYIEQSSTPMDAFERIYRYMD
KGNELRREHDTDFLALEVARLIAKRRQDWQEAHPAQDANQRRVAFIIDSLKHESEVQALRQIYSTGFFQLSLYESKKARE
NTLIHDYAIRPESAKILIERDEGEANDYGQHTSEAFHLADYFLKFDQHYSEQSLGSQQELRASCFRFLRILFADPYITPT
FNEFATYMSFTASVRSADLSRQVGAVIARNNTILAIGSNDVPKFQGGTYWPYFDENTGEVKDLESGRDYMRGFDANTIEK
NKIIDDLFQQLANAIDQSVDAERTTPLKLQIHQILKESKIKKITEYGRVVHAEMDALLSCSRSNISTQGATLFVTTFPCH
NCAKHIISAGIEKVVFVEPYPKSKALMMHEDSITQKWEGQEYTEQNKLIFEPFVGVGARSFVNLFSMSLGSGRKLKRKSK
EGYVLSWNAKTAELRLPMYYLSHRELEQEIEQSMLKKSF
>Mature_519_residues
MLEIMLLEQIQKVSHELIIGLVGAVGSRLNVLTSTLMDLLHNEFAYDVEVITISKDILARYIEQSSTPMDAFERIYRYMD
KGNELRREHDTDFLALEVARLIAKRRQDWQEAHPAQDANQRRVAFIIDSLKHESEVQALRQIYSTGFFQLSLYESKKARE
NTLIHDYAIRPESAKILIERDEGEANDYGQHTSEAFHLADYFLKFDQHYSEQSLGSQQELRASCFRFLRILFADPYITPT
FNEFATYMSFTASVRSADLSRQVGAVIARNNTILAIGSNDVPKFQGGTYWPYFDENTGEVKDLESGRDYMRGFDANTIEK
NKIIDDLFQQLANAIDQSVDAERTTPLKLQIHQILKESKIKKITEYGRVVHAEMDALLSCSRSNISTQGATLFVTTFPCH
NCAKHIISAGIEKVVFVEPYPKSKALMMHEDSITQKWEGQEYTEQNKLIFEPFVGVGARSFVNLFSMSLGSGRKLKRKSK
EGYVLSWNAKTAELRLPMYYLSHRELEQEIEQSMLKKSF

Specific function: Unknown

COG id: COG2131

COG function: function code F; Deoxycytidylate deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.5

Molecular weight: Translated: 59626; Mature: 59626

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEIMLLEQIQKVSHELIIGLVGAVGSRLNVLTSTLMDLLHNEFAYDVEVITISKDILAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECHHHHHH
YIEQSSTPMDAFERIYRYMDKGNELRREHDTDFLALEVARLIAKRRQDWQEAHPAQDANQ
HHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RRVAFIIDSLKHESEVQALRQIYSTGFFQLSLYESKKARENTLIHDYAIRPESAKILIER
CCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCEEEEEEECCCCCEEEEEC
DEGEANDYGQHTSEAFHLADYFLKFDQHYSEQSLGSQQELRASCFRFLRILFADPYITPT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
FNEFATYMSFTASVRSADLSRQVGAVIARNNTILAIGSNDVPKFQGGTYWPYFDENTGEV
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCEECCCCCCCCCCH
KDLESGRDYMRGFDANTIEKNKIIDDLFQQLANAIDQSVDAERTTPLKLQIHQILKESKI
HHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
KKITEYGRVVHAEMDALLSCSRSNISTQGATLFVTTFPCHNCAKHIISAGIEKVVFVEPY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCC
PKSKALMMHEDSITQKWEGQEYTEQNKLIFEPFVGVGARSFVNLFSMSLGSGRKLKRKSK
CCCCEEEEECCCHHHCCCCCCHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCHHHHCCC
EGYVLSWNAKTAELRLPMYYLSHRELEQEIEQSMLKKSF
CCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLEIMLLEQIQKVSHELIIGLVGAVGSRLNVLTSTLMDLLHNEFAYDVEVITISKDILAR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECHHHHHH
YIEQSSTPMDAFERIYRYMDKGNELRREHDTDFLALEVARLIAKRRQDWQEAHPAQDANQ
HHHHCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RRVAFIIDSLKHESEVQALRQIYSTGFFQLSLYESKKARENTLIHDYAIRPESAKILIER
CCHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEHHHHHHCCCEEEEEEECCCCCEEEEEC
DEGEANDYGQHTSEAFHLADYFLKFDQHYSEQSLGSQQELRASCFRFLRILFADPYITPT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
FNEFATYMSFTASVRSADLSRQVGAVIARNNTILAIGSNDVPKFQGGTYWPYFDENTGEV
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCCCCCCCCEECCCCCCCCCCH
KDLESGRDYMRGFDANTIEKNKIIDDLFQQLANAIDQSVDAERTTPLKLQIHQILKESKI
HHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
KKITEYGRVVHAEMDALLSCSRSNISTQGATLFVTTFPCHNCAKHIISAGIEKVVFVEPY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCC
PKSKALMMHEDSITQKWEGQEYTEQNKLIFEPFVGVGARSFVNLFSMSLGSGRKLKRKSK
CCCCEEEEECCCHHHCCCCCCHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCHHHHCCC
EGYVLSWNAKTAELRLPMYYLSHRELEQEIEQSMLKKSF
CCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: cytidine; H2O

Specific reaction: cytidine + H2O = uridine + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA