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The map label for this gene is recO [H]

Identifier: 50085653

GI number: 50085653

Start: 2537001

End: 2537711

Strand: Reverse

Name: recO [H]

Synonym: ACIAD2578

Alternate gene names: 50085653

Gene position: 2537711-2537001 (Counterclockwise)

Preceding gene: 50085654

Following gene: 50085652

Centisome position: 70.52

GC content: 37.27

Gene sequence:

>711_bases
ATGCGAAATGAAGTTCTGCATGGCTATTTGATTCATCATCGTCGATATCGAGAAAAAAGCCATATTGTTCATTTGTTTAC
CGAAGAATATGGTCGTATCGACGGGATTTTGAGGCAAATACCTCCACCGCAATATCAACCTATTACCTTACAGGCTACAG
GCAAAGGTGAGCTTAAAAACTTTACCAAGCTGGAGATTATGAATTATCCAGTATTTTTTCATGGTGATGCTTTTTTTGCT
GGTTTTTATTTAAATGAAGTGCTGCTGCGTTTGTGCCCGCTTGAAGAGGCAATGCCCCAGACTTTTCAGCAATATCAGAT
CATTTTGCAACAGCTTCAGTTGCTTAACCAACATCAACAACCAGCCATTTTTTTAAAGCAAATTTTAAGACAATTTGAAC
ACGTACTCTTACAAGAACTAGGATATGCCATCGATTTTGAAATAGATTGTAATCAGAATCAAATTAACCCATTAGCGTCA
TATCAATTTCAACCGACAGAAGGTTTCTTACCTGTTTCACAGCAGAGCCATTTGACTGTGTCAGGACAATTGATTTGCTG
CATGCAAAATTATCAGGCAGGACAAGAATTTTCTACGGAACAATTACAATTATTGGGTAAACTATACCGTCAAATGATTA
CATCTTTGTTGGGTGATCGACCTTTAAAGAGTCGCCAACTTTGGATTCAAAATACTCAATCTCATTCGTAA

Upstream 100 bases:

>100_bases
GTGTTGTAAAAGGAACTGCTGCGGTAGTTGGTGCAGTTATTCCTGATGGAGATGATGACGATGCAAAAGATCAGAACAAA
AAGGATTAATCGTCTTTTTT

Downstream 100 bases:

>100_bases
ATAGGATTTTTTTATGGCTGCATTGCTTGGTGTCAATATTGATCATGTAGCGACCTTGAGACAGGCGAGAGGAACACGTT
ATCCAGATCCAGTGAGTGCT

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MRNEVLHGYLIHHRRYREKSHIVHLFTEEYGRIDGILRQIPPPQYQPITLQATGKGELKNFTKLEIMNYPVFFHGDAFFA
GFYLNEVLLRLCPLEEAMPQTFQQYQIILQQLQLLNQHQQPAIFLKQILRQFEHVLLQELGYAIDFEIDCNQNQINPLAS
YQFQPTEGFLPVSQQSHLTVSGQLICCMQNYQAGQEFSTEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQSHS

Sequences:

>Translated_236_residues
MRNEVLHGYLIHHRRYREKSHIVHLFTEEYGRIDGILRQIPPPQYQPITLQATGKGELKNFTKLEIMNYPVFFHGDAFFA
GFYLNEVLLRLCPLEEAMPQTFQQYQIILQQLQLLNQHQQPAIFLKQILRQFEHVLLQELGYAIDFEIDCNQNQINPLAS
YQFQPTEGFLPVSQQSHLTVSGQLICCMQNYQAGQEFSTEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQSHS
>Mature_236_residues
MRNEVLHGYLIHHRRYREKSHIVHLFTEEYGRIDGILRQIPPPQYQPITLQATGKGELKNFTKLEIMNYPVFFHGDAFFA
GFYLNEVLLRLCPLEEAMPQTFQQYQIILQQLQLLNQHQQPAIFLKQILRQFEHVLLQELGYAIDFEIDCNQNQINPLAS
YQFQPTEGFLPVSQQSHLTVSGQLICCMQNYQAGQEFSTEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQSHS

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

Organism=Escherichia coli, GI2367140, Length=235, Percent_Identity=25.1063829787234, Blast_Score=88, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27706; Mature: 27706

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNEVLHGYLIHHRRYREKSHIVHLFTEEYGRIDGILRQIPPPQYQPITLQATGKGELKN
CCCCHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
FTKLEIMNYPVFFHGDAFFAGFYLNEVLLRLCPLEEAMPQTFQQYQIILQQLQLLNQHQQ
CEEEEEECCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAIFLKQILRQFEHVLLQELGYAIDFEIDCNQNQINPLASYQFQPTEGFLPVSQQSHLTV
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHCCEECCCCCCCCCCCCCCEEE
SGQLICCMQNYQAGQEFSTEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQSHS
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCC
>Mature Secondary Structure
MRNEVLHGYLIHHRRYREKSHIVHLFTEEYGRIDGILRQIPPPQYQPITLQATGKGELKN
CCCCHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCC
FTKLEIMNYPVFFHGDAFFAGFYLNEVLLRLCPLEEAMPQTFQQYQIILQQLQLLNQHQQ
CEEEEEECCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PAIFLKQILRQFEHVLLQELGYAIDFEIDCNQNQINPLASYQFQPTEGFLPVSQQSHLTV
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHCCEECCCCCCCCCCCCCCEEE
SGQLICCMQNYQAGQEFSTEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQSHS
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA