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The map label for this gene is atoE [H]

Identifier: 50085594

GI number: 50085594

Start: 2469711

End: 2471120

Strand: Direct

Name: atoE [H]

Synonym: ACIAD2515

Alternate gene names: 50085594

Gene position: 2469711-2471120 (Clockwise)

Preceding gene: 50085593

Following gene: 50085595

Centisome position: 68.63

GC content: 43.69

Gene sequence:

>1410_bases
ATGGATAAACAACCTGCGCTTTTGGAGCGTTTTGCCTTAAAAGTCAGTGACTGGTCAGAAAAATGGTTTCCTGATTCTTA
TATTTTTGCGCTACTTGGCGTCATTATTGTGTCGCTTGCCGCAATTTTCATTGGTGCGCCAGTCAAAGATGTGGCAGGCG
CATTTGGAAACGGTTTTTGGAGTCTCATCCCGTTTACACTGCAAATGACCATGCTGATTATTGTCGGTTATGTGGTTTCT
GTTTCTGCACCTGTGAAAAAACTCATTCAGAAAATGGCACGTTTGCCACATTCAGGTCGCGGTGCCATTGTAATGGTGGC
CACCGTGAGTTTGCTCATTTCTTTGGTCAACTGGGCAATTAGTACGATCTTGACAGCATTACTGGTCATTGCGCTGGCAA
AACGCAAAGAACTCAACATGGATTATCGTGCTGCTGCCGCTGCCGCAATTATTGGCATGGGCGCCACTTGGGCACTCGGT
ATTAGCTCATCGGCTGCACAGTTGCAGGCCAATAAAACCAGTTTGCCAGAATCCATTTATAACCTGACAGGTGTGATTCC
ATTTACCCAAACTATTTTCTTATGGCAATCACTGGTCATGACACTGGTGCTGGTGATTGTGTCTATTGTGATTGCATATT
GGTCGGCACCTAAAGGTCAAAATGTCAAAACCATGCAGGATTTTCATCTGGATTTTGAAGATGAAGAAAAAGCTGAACCC
AAATCGACCCGCCCTGGTGACTGGCTAGAAAATTCGCCTATTTTAACCATTTTAATTGTGGTACTTGGGCTGGGCTGGAT
GCTTATGGAATTTTCCAAAAACAATCCTATTATTGCAATTTCTAGTTTGAATACTTACAACTTTATCTTTTTGATGCTCG
GTCTGGCGTTGCATCGGACACCCCGTAATTTCCTCAATGCCGTGAGCAAGGCCGTTCCTGCGGTTTCAGGCGTGCTGATC
CAGTTTCCACTGTATGGCAGCATTGCTTTCATTATGACGCAAGCGGTCAATGCTCAGGACTTTTCGCTCTCTCATTATAT
TGCTGAATTTTTTGTTTCGATTGCATCACATGATACTTTTGCAGTGGTGATGGGAATTTACTCTGCCATTCTGGGATTTT
TTGTACCTTCTGGCGGTGGCAAATGGATTATCGAAGCACCTTATGTCATGCAGGCTGCAAACGATCTTCAGTATCATTTG
GGTTGGTCAGTTCAAATTTACAATGCAGCCGAAGCCTTACCCAACCTGATCAATCCATTTTTTATGTTGCCCATGCTAGG
CATTCTTAAACTCAAACCCAAAGATGTCATTGGGTTTACCGTAACGCAACTGGTGGTACATTTACCGCTGGTGATGTTTT
TATTATGGATTCTTGGAAAAACACTGAGCTATACCCCACCCGTATTTTAA

Upstream 100 bases:

>100_bases
AGTTAGAACAGATAAGGTTCCATGAAGGAACCTAAAAATAAAGCGTGATCGGCTCAATGAGACTGATCACTCAAAATACA
ATAAAAGACGGATTTTAATT

Downstream 100 bases:

>100_bases
CGATGAGCATAAATGTGGTGTCTTAAAATCACATCCATTTAAGAAGGACTTTGGATATGTCAAAAATTATGATTGCAGCA
GCAGCCCGAACCCCGATGGG

Product: short-chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MDKQPALLERFALKVSDWSEKWFPDSYIFALLGVIIVSLAAIFIGAPVKDVAGAFGNGFWSLIPFTLQMTMLIIVGYVVS
VSAPVKKLIQKMARLPHSGRGAIVMVATVSLLISLVNWAISTILTALLVIALAKRKELNMDYRAAAAAAIIGMGATWALG
ISSSAAQLQANKTSLPESIYNLTGVIPFTQTIFLWQSLVMTLVLVIVSIVIAYWSAPKGQNVKTMQDFHLDFEDEEKAEP
KSTRPGDWLENSPILTILIVVLGLGWMLMEFSKNNPIIAISSLNTYNFIFLMLGLALHRTPRNFLNAVSKAVPAVSGVLI
QFPLYGSIAFIMTQAVNAQDFSLSHYIAEFFVSIASHDTFAVVMGIYSAILGFFVPSGGGKWIIEAPYVMQAANDLQYHL
GWSVQIYNAAEALPNLINPFFMLPMLGILKLKPKDVIGFTVTQLVVHLPLVMFLLWILGKTLSYTPPVF

Sequences:

>Translated_469_residues
MDKQPALLERFALKVSDWSEKWFPDSYIFALLGVIIVSLAAIFIGAPVKDVAGAFGNGFWSLIPFTLQMTMLIIVGYVVS
VSAPVKKLIQKMARLPHSGRGAIVMVATVSLLISLVNWAISTILTALLVIALAKRKELNMDYRAAAAAAIIGMGATWALG
ISSSAAQLQANKTSLPESIYNLTGVIPFTQTIFLWQSLVMTLVLVIVSIVIAYWSAPKGQNVKTMQDFHLDFEDEEKAEP
KSTRPGDWLENSPILTILIVVLGLGWMLMEFSKNNPIIAISSLNTYNFIFLMLGLALHRTPRNFLNAVSKAVPAVSGVLI
QFPLYGSIAFIMTQAVNAQDFSLSHYIAEFFVSIASHDTFAVVMGIYSAILGFFVPSGGGKWIIEAPYVMQAANDLQYHL
GWSVQIYNAAEALPNLINPFFMLPMLGILKLKPKDVIGFTVTQLVVHLPLVMFLLWILGKTLSYTPPVF
>Mature_469_residues
MDKQPALLERFALKVSDWSEKWFPDSYIFALLGVIIVSLAAIFIGAPVKDVAGAFGNGFWSLIPFTLQMTMLIIVGYVVS
VSAPVKKLIQKMARLPHSGRGAIVMVATVSLLISLVNWAISTILTALLVIALAKRKELNMDYRAAAAAAIIGMGATWALG
ISSSAAQLQANKTSLPESIYNLTGVIPFTQTIFLWQSLVMTLVLVIVSIVIAYWSAPKGQNVKTMQDFHLDFEDEEKAEP
KSTRPGDWLENSPILTILIVVLGLGWMLMEFSKNNPIIAISSLNTYNFIFLMLGLALHRTPRNFLNAVSKAVPAVSGVLI
QFPLYGSIAFIMTQAVNAQDFSLSHYIAEFFVSIASHDTFAVVMGIYSAILGFFVPSGGGKWIIEAPYVMQAANDLQYHL
GWSVQIYNAAEALPNLINPFFMLPMLGILKLKPKDVIGFTVTQLVVHLPLVMFLLWILGKTLSYTPPVF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=442, Percent_Identity=32.579185520362, Blast_Score=226, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 51466; Mature: 51466

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]