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The map label for this gene is thcC [H]

Identifier: 50084741

GI number: 50084741

Start: 1571127

End: 1571441

Strand: Direct

Name: thcC [H]

Synonym: ACIAD1579

Alternate gene names: 50084741

Gene position: 1571127-1571441 (Clockwise)

Preceding gene: 50084740

Following gene: 50084742

Centisome position: 43.66

GC content: 45.08

Gene sequence:

>315_bases
ATGCCAACGATTGCCATTGTCACTCGTGAAGGTGAACGCACCTCGGTTACCGTTGAAAATCAACTTTCACTCATGGAGAA
CTTGCGAAATGCGGGAGTTGGGGATATTAGCGCTTTATGCGGTGGCTGTTGTTCTTGCGCTACTTGTCATGTGTACATTC
TGGAGGGCTATGCTCATTTAAACCCATTGGGTGATGACGAAAATGACATGCTCGATAGTAGCTTATCACGCCGCGAATCT
TCTCGTTTAGCCTGTCAGGTCATCATTGATGAACAATGTGATGATCTTGTAGTTGAAATTGCACTGGAGGAATAA

Upstream 100 bases:

>100_bases
GAAATTAATCAGGCCATACAAGATCAGGCACAAGGCCGCTGTATAAAAGCGGTTCTCATTCCTGAACATGCCCATCATTA
GAAAAAAAAAGGAGAGTTTT

Downstream 100 bases:

>100_bases
ATGTCAAATTACGATGTGATTATCGTGGGCACAGGGCATGCGGGCGGACAGGCGGCTGTCGCACTCAGACAACAAGGATT
TACTGGATCAATTTTGATGA

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MPTIAIVTREGERTSVTVENQLSLMENLRNAGVGDISALCGGCCSCATCHVYILEGYAHLNPLGDDENDMLDSSLSRRES
SRLACQVIIDEQCDDLVVEIALEE

Sequences:

>Translated_104_residues
MPTIAIVTREGERTSVTVENQLSLMENLRNAGVGDISALCGGCCSCATCHVYILEGYAHLNPLGDDENDMLDSSLSRRES
SRLACQVIIDEQCDDLVVEIALEE
>Mature_103_residues
PTIAIVTREGERTSVTVENQLSLMENLRNAGVGDISALCGGCCSCATCHVYILEGYAHLNPLGDDENDMLDSSLSRRESS
RLACQVIIDEQCDDLVVEIALEE

Specific function: Ferredoxin-type protein which transfers electrons from rhodocoxin reductase to cytochrome CYP116 (ThcB), which is involved in the degradation of thiocarbamate herbicides [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 11291; Mature: 11160

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIAIVTREGERTSVTVENQLSLMENLRNAGVGDISALCGGCCSCATCHVYILEGYAHL
CCEEEEEEECCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHEEECHHHC
NPLGDDENDMLDSSLSRRESSRLACQVIIDEQCDDLVVEIALEE
CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure 
PTIAIVTREGERTSVTVENQLSLMENLRNAGVGDISALCGGCCSCATCHVYILEGYAHL
CEEEEEEECCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHEEECHHHC
NPLGDDENDMLDSSLSRRESSRLACQVIIDEQCDDLVVEIALEE
CCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]