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The map label for this gene is xynB [H]

Identifier: 50084544

GI number: 50084544

Start: 1360744

End: 1361643

Strand: Reverse

Name: xynB [H]

Synonym: ACIAD1365

Alternate gene names: 50084544

Gene position: 1361643-1360744 (Counterclockwise)

Preceding gene: 50084545

Following gene: 50084536

Centisome position: 37.84

GC content: 40.56

Gene sequence:

>900_bases
ATGTTTATATCACTTTTCATATTGACCTGTTTACATCCTTGTTATGGCCACCCATCCGATATTATTTTATGGGATCACCA
CGTCGTTCCTAATTCTGCTGATATTATTCAAAACGAACAACTCTCAAAAACAGGATCAATTACGAGAGTTTCAACACCAC
GCCTGCATATATACCGCCCTACATATCAACAGAATCACGCTGCAATTTTAGTGATTAGTGGCGGCGGTTATGCACATGAA
GAACTTGGACATGAAGGAACACCCACTTCAAAATATCTACAAAAACAAGGATTTACTGTGTTTGAGCTCGTTTATCGACT
CCCCCAAGAAGGATGGACAAGTCCTTTAGTGCCATTTCAAGATGGTCAACGAGCGATGTGTATTATCCGCTCACAATCAA
AATTTTACGGCTACGATTCAGATAAAATAGGCATCATTGGGTTTTCTGCTGGTGGACATTTGGCTGGAATACTTTCAACG
ACATGGAAAACTCCATATTATCCGCCTACTGATGCAATCGATACCATATCCTCACGTCCAAATTTTAGCATTTTAATTTA
CCCAGTGATTAGCATGATACCTCCACTTAACCATACACATGCCTATAAAAGCTTACTCGGTATACACTCTTCGCTGGCAG
ATCAACAAGCCCTTTCAGTTCAACTTCTTGTCACCCCCGAAACACCACCCACTTTTATTGCTCATGCCAAAGATGATCCA
GTCTCATCAGTTAAAAATAGCATTCTGCTACATCAGGCTCTAGATAAGAATCATGTGATCAATCAAATGATTTTATTCCC
TGATGGTGGGCACGGCTGGGGATTAGGTAAGAAAGGAACAACTACCACACAGTGGCCGGCTTTAATGATGCAATGGCTTA
AAGAAACCAAGATTATTTGA

Upstream 100 bases:

>100_bases
GTCTTTATAATAATCCAAAATCAATATATTCATACGAAGTTTACTGATACATTAAGTCTAAATAGATCATTTTATAAAAT
GAGAAAATATGAAAATAAAA

Downstream 100 bases:

>100_bases
GCTTATTTTAACAGCCCTTGAGGTTGCAAAATAATCAAGGCAGCTCCTAGCAATACAACAGTCCCACCCCAAATATCCCA
ACGTGTTAATGTCACTTGAT

Product: esterase/lipase

Products: NA

Alternate protein names: Xylanase B; 1,4-beta-D-xylan xylanohydrolase B [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFISLFILTCLHPCYGHPSDIILWDHHVVPNSADIIQNEQLSKTGSITRVSTPRLHIYRPTYQQNHAAILVISGGGYAHE
ELGHEGTPTSKYLQKQGFTVFELVYRLPQEGWTSPLVPFQDGQRAMCIIRSQSKFYGYDSDKIGIIGFSAGGHLAGILST
TWKTPYYPPTDAIDTISSRPNFSILIYPVISMIPPLNHTHAYKSLLGIHSSLADQQALSVQLLVTPETPPTFIAHAKDDP
VSSVKNSILLHQALDKNHVINQMILFPDGGHGWGLGKKGTTTTQWPALMMQWLKETKII

Sequences:

>Translated_299_residues
MFISLFILTCLHPCYGHPSDIILWDHHVVPNSADIIQNEQLSKTGSITRVSTPRLHIYRPTYQQNHAAILVISGGGYAHE
ELGHEGTPTSKYLQKQGFTVFELVYRLPQEGWTSPLVPFQDGQRAMCIIRSQSKFYGYDSDKIGIIGFSAGGHLAGILST
TWKTPYYPPTDAIDTISSRPNFSILIYPVISMIPPLNHTHAYKSLLGIHSSLADQQALSVQLLVTPETPPTFIAHAKDDP
VSSVKNSILLHQALDKNHVINQMILFPDGGHGWGLGKKGTTTTQWPALMMQWLKETKII
>Mature_299_residues
MFISLFILTCLHPCYGHPSDIILWDHHVVPNSADIIQNEQLSKTGSITRVSTPRLHIYRPTYQQNHAAILVISGGGYAHE
ELGHEGTPTSKYLQKQGFTVFELVYRLPQEGWTSPLVPFQDGQRAMCIIRSQSKFYGYDSDKIGIIGFSAGGHLAGILST
TWKTPYYPPTDAIDTISSRPNFSILIYPVISMIPPLNHTHAYKSLLGIHSSLADQQALSVQLLVTPETPPTFIAHAKDDP
VSSVKNSILLHQALDKNHVINQMILFPDGGHGWGLGKKGTTTTQWPALMMQWLKETKII

Specific function: B.fibrisolvens is located in the rumen of ruminant animals, where it contributes to the animal's digestion of plant material by hydrolyzing hemicellulose with its xylanases [H]

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 10 (cellulase F) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013094
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07859 Abhydrolase_3; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 33234; Mature: 33234

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISLFILTCLHPCYGHPSDIILWDHHVVPNSADIIQNEQLSKTGSITRVSTPRLHIYRP
CHHHHHHHHHHHHHCCCCCCEEEEECEECCCCHHHHCCCHHHCCCCEEEECCCEEEEECC
TYQQNHAAILVISGGGYAHEELGHEGTPTSKYLQKQGFTVFELVYRLPQEGWTSPLVPFQ
CCCCCCEEEEEECCCCCCHHHCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
DGQRAMCIIRSQSKFYGYDSDKIGIIGFSAGGHLAGILSTTWKTPYYPPTDAIDTISSRP
CCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEHHHHCCCCCCCCCCCHHHHHCCCC
NFSILIYPVISMIPPLNHTHAYKSLLGIHSSLADQQALSVQLLVTPETPPTFIAHAKDDP
CCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCH
VSSVKNSILLHQALDKNHVINQMILFPDGGHGWGLGKKGTTTTQWPALMMQWLKETKII
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFISLFILTCLHPCYGHPSDIILWDHHVVPNSADIIQNEQLSKTGSITRVSTPRLHIYRP
CHHHHHHHHHHHHHCCCCCCEEEEECEECCCCHHHHCCCHHHCCCCEEEECCCEEEEECC
TYQQNHAAILVISGGGYAHEELGHEGTPTSKYLQKQGFTVFELVYRLPQEGWTSPLVPFQ
CCCCCCEEEEEECCCCCCHHHCCCCCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
DGQRAMCIIRSQSKFYGYDSDKIGIIGFSAGGHLAGILSTTWKTPYYPPTDAIDTISSRP
CCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEHHHHCCCCCCCCCCCHHHHHCCCC
NFSILIYPVISMIPPLNHTHAYKSLLGIHSSLADQQALSVQLLVTPETPPTFIAHAKDDP
CCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEECCCCH
VSSVKNSILLHQALDKNHVINQMILFPDGGHGWGLGKKGTTTTQWPALMMQWLKETKII
HHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909424 [H]