| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476170
Identifier: 49476170
GI number: 49476170
Start: 1737024
End: 1737557
Strand: Reverse
Name: 49476170
Synonym: BH15130
Alternate gene names: NA
Gene position: 1737557-1737024 (Counterclockwise)
Preceding gene: 49476172
Following gene: 49476169
Centisome position: 89.98
GC content: 44.38
Gene sequence:
>534_bases ATGTTTTGTTTTAGAGGGTTACATCATAAAGGTGGTTTTGTGGTTGCCGAAAAACAGACAGGGGTGTTTCAGAGAGTACG AGAGATTTTTCTCTTGAGCGTTTTGCTCTTGTTGCCGTTTGCTGGTTTTGCAAAAGCTGATTTCCGGGTTTGTAATACGA CTCAACAGCCCGTTGGTGTCGCCCTTGGGTATCGTACATTTTCAGGTTGGGTAAGTGAGGGATGGTGGGTGGTCCCCGTG ACAGAGTGTAAAACCTTGATCGAGGGTCCTCTTTCTTCGCGCTTCTATTATTTTTATGCAGAGGGAGCAGAGAAAAAAAA CAGCTGGCCAGGTTCGGTGACTATGTGTGTGCAAGATAGCCAATTTACTATTCAAGGGGTTCATGATTGTTTCCCTCGTG GTTATCAAAAGGCTGAATTTAAAGAAATTGATACGGGTAATCAAACCAGTTGGATGGTACAGTTGACCGATGAGTCTTTG TTCAATAATTCCGTTGTACAGTCCCCCTCTCTTTCAGGAGATTCTCCACCGTGA
Upstream 100 bases:
>100_bases CTCTTTGCATTGACAAAAGGGCATTAAGAAGCAGAAAAGAGTAAAAATATGTCTATATACATTTGGAAAGTTCTTGAAAA CAGAGAAGATAAAGGGATGT
Downstream 100 bases:
>100_bases AGCGTGCACGTAAAGTAAAAATTATAGCCACTCTTGGCCCTTCTTCGTTTTCTATTTCCATGATTGAGAAGCTTTTTATG GCGGGAGCAGATGTTTTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MFCFRGLHHKGGFVVAEKQTGVFQRVREIFLLSVLLLLPFAGFAKADFRVCNTTQQPVGVALGYRTFSGWVSEGWWVVPV TECKTLIEGPLSSRFYYFYAEGAEKKNSWPGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMVQLTDESL FNNSVVQSPSLSGDSPP
Sequences:
>Translated_177_residues MFCFRGLHHKGGFVVAEKQTGVFQRVREIFLLSVLLLLPFAGFAKADFRVCNTTQQPVGVALGYRTFSGWVSEGWWVVPV TECKTLIEGPLSSRFYYFYAEGAEKKNSWPGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMVQLTDESL FNNSVVQSPSLSGDSPP >Mature_177_residues MFCFRGLHHKGGFVVAEKQTGVFQRVREIFLLSVLLLLPFAGFAKADFRVCNTTQQPVGVALGYRTFSGWVSEGWWVVPV TECKTLIEGPLSSRFYYFYAEGAEKKNSWPGSVTMCVQDSQFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMVQLTDESL FNNSVVQSPSLSGDSPP
Specific function: Unknown
COG id: COG5480
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19856; Mature: 19856
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCFRGLHHKGGFVVAEKQTGVFQRVREIFLLSVLLLLPFAGFAKADFRVCNTTQQPVGV CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEE ALGYRTFSGWVSEGWWVVPVTECKTLIEGPLSSRFYYFYAEGAEKKNSWPGSVTMCVQDS EECCHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECC QFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMVQLTDESLFNNSVVQSPSLSGDSPP CEEEECHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MFCFRGLHHKGGFVVAEKQTGVFQRVREIFLLSVLLLLPFAGFAKADFRVCNTTQQPVGV CCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEE ALGYRTFSGWVSEGWWVVPVTECKTLIEGPLSSRFYYFYAEGAEKKNSWPGSVTMCVQDS EECCHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEEEEEECC QFTIQGVHDCFPRGYQKAEFKEIDTGNQTSWMVQLTDESLFNNSVVQSPSLSGDSPP CEEEECHHHHCCCCCCCCCCEECCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA