| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
Click here to switch to the map view.
The map label for this gene is pykA [H]
Identifier: 49476169
GI number: 49476169
Start: 1735591
End: 1737027
Strand: Reverse
Name: pykA [H]
Synonym: BH15120
Alternate gene names: 49476169
Gene position: 1737027-1735591 (Counterclockwise)
Preceding gene: 49476170
Following gene: 49476166
Centisome position: 89.95
GC content: 47.39
Gene sequence:
>1437_bases GTGAAGCGTGCACGTAAAGTAAAAATTATAGCCACTCTTGGCCCTTCTTCGTTTTCTATTTCCATGATTGAGAAGCTTTT TATGGCGGGAGCAGATGTTTTTCGTTTGAATATGAGCCATACTGACCGTGAAACAATGGTTGATTTGGTTCAGCGCATAC GGAAGGTTGAAAAAACTGTTCGCCGGCCAATCGGTATTTTAGTAGATCTCCAGGGACCAAAATTACGCGTCGGCTGTTTT GATAAAGGGCAAGAAGATTTGCGTATTGGGCAAAGTTTTACCTTGGATGATCGTGATATTCTTGGTGATGCGCAGCGTGT TTTTTTTCCGCACGGGGAGGTGCTGGCAGCTATTAAACCCGGTGATCGGTTGTTAATTGATGATGGAAAGTTGGAACTGC TTGCACAGGTGTGTGATGGTCATTCTGTGCAGTGCCTTGTGGTTGCTGGGAACCGTATTTCTGATCGAAAAGGGGTAAGT CTTCCCGATACAGTTTTGCCTTTTGGGCCAATGACTCTCAAGGATAAAGCCGATCTTCAGGCAGTTTTGGAGCAGCCTGT TGATTGGGTTGCTCTGTCTTTTATCCAGCGTCCGGAAGATATTATAGCAGTGCGTGCGTTGACCAAAAGCAAAGTGTCTT TGATGGCTAAGATCGAAAAACCTCAAGCTTTGGAGCATATAGAAGAGATTATTGATGTTGCCGATGGTATTATGATTGCA CGCGGAGATCTGGGGGTAGAAATGCCCTTGGAGAGGGTTCCTGCCATTCAGATGGAACTTATAAAAGCTTGTCGTTTAGC TGGAAAGCCCGTCGTGGTGGCCACGCAAATGCTCGAGTCAATGATTACGTCATCTGTTCCTACAAGGGCAGAAGTTTCTG ATGTTGCGACAGCAGTTTATACGGGAACTGACGCTGTCATGTTGTCTGCGGAATCTGCCTCTGGTCGTTATCCTGAAGAA GCTGTGCTGATGATGGATCGAATCGCACAACAAATTGAACAAGATCAGACTTATGCGGCTCAAGTTGGCGCACAGCATCC TGCTCCAGAATCAACGGGGACCGATGCGATTTCTCTCGCTGCGCGTCAGATCGCCGAAACACTGCAATTGACAGCTATCG TTGCTTATACTGCTTCAGGCACAACGGGTGTGCGCACATCACGGGAGCGTCCAAACAGGCCCATTATTGCCTTATCGCCT ATTGTAAAAACAGCAAGACGTTTGGCTTTGGTCTGGGGACTTCATTGTGTGGTCACTGAAGACGCGCGGGATTTGGAGGA TATGGTTGATCGTGCGGCTGCGATTGCTTTTCAAGAAGGCTTTTGCCAAGGGGGAGATCGCTTCCTTGTGACAGCTGGTG TTCCTCTTGGTACACCTGGTGCTACCAATCTCTTGCGTATCGCTTCTGTTTCTCAAGATGGAACAAAGGGTGTTTAA
Upstream 100 bases:
>100_bases ATACGGGTAATCAAACCAGTTGGATGGTACAGTTGACCGATGAGTCTTTGTTCAATAATTCCGTTGTACAGTCCCCCTCT CTTTCAGGAGATTCTCCACC
Downstream 100 bases:
>100_bases CGGGAACATTGGGGCATAGTTTTCTTTATATTTTGAAGAATATATTCCATTTGTCATCTGTTTTTCTATGAGCAGAGATG TGTGATGTTTCTGCAGCGGT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MKRARKVKIIATLGPSSFSISMIEKLFMAGADVFRLNMSHTDRETMVDLVQRIRKVEKTVRRPIGILVDLQGPKLRVGCF DKGQEDLRIGQSFTLDDRDILGDAQRVFFPHGEVLAAIKPGDRLLIDDGKLELLAQVCDGHSVQCLVVAGNRISDRKGVS LPDTVLPFGPMTLKDKADLQAVLEQPVDWVALSFIQRPEDIIAVRALTKSKVSLMAKIEKPQALEHIEEIIDVADGIMIA RGDLGVEMPLERVPAIQMELIKACRLAGKPVVVATQMLESMITSSVPTRAEVSDVATAVYTGTDAVMLSAESASGRYPEE AVLMMDRIAQQIEQDQTYAAQVGAQHPAPESTGTDAISLAARQIAETLQLTAIVAYTASGTTGVRTSRERPNRPIIALSP IVKTARRLALVWGLHCVVTEDARDLEDMVDRAAAIAFQEGFCQGGDRFLVTAGVPLGTPGATNLLRIASVSQDGTKGV
Sequences:
>Translated_478_residues MKRARKVKIIATLGPSSFSISMIEKLFMAGADVFRLNMSHTDRETMVDLVQRIRKVEKTVRRPIGILVDLQGPKLRVGCF DKGQEDLRIGQSFTLDDRDILGDAQRVFFPHGEVLAAIKPGDRLLIDDGKLELLAQVCDGHSVQCLVVAGNRISDRKGVS LPDTVLPFGPMTLKDKADLQAVLEQPVDWVALSFIQRPEDIIAVRALTKSKVSLMAKIEKPQALEHIEEIIDVADGIMIA RGDLGVEMPLERVPAIQMELIKACRLAGKPVVVATQMLESMITSSVPTRAEVSDVATAVYTGTDAVMLSAESASGRYPEE AVLMMDRIAQQIEQDQTYAAQVGAQHPAPESTGTDAISLAARQIAETLQLTAIVAYTASGTTGVRTSRERPNRPIIALSP IVKTARRLALVWGLHCVVTEDARDLEDMVDRAAAIAFQEGFCQGGDRFLVTAGVPLGTPGATNLLRIASVSQDGTKGV >Mature_478_residues MKRARKVKIIATLGPSSFSISMIEKLFMAGADVFRLNMSHTDRETMVDLVQRIRKVEKTVRRPIGILVDLQGPKLRVGCF DKGQEDLRIGQSFTLDDRDILGDAQRVFFPHGEVLAAIKPGDRLLIDDGKLELLAQVCDGHSVQCLVVAGNRISDRKGVS LPDTVLPFGPMTLKDKADLQAVLEQPVDWVALSFIQRPEDIIAVRALTKSKVSLMAKIEKPQALEHIEEIIDVADGIMIA RGDLGVEMPLERVPAIQMELIKACRLAGKPVVVATQMLESMITSSVPTRAEVSDVATAVYTGTDAVMLSAESASGRYPEE AVLMMDRIAQQIEQDQTYAAQVGAQHPAPESTGTDAISLAARQIAETLQLTAIVAYTASGTTGVRTSRERPNRPIIALSP IVKTARRLALVWGLHCVVTEDARDLEDMVDRAAAIAFQEGFCQGGDRFLVTAGVPLGTPGATNLLRIASVSQDGTKGV
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI32967597, Length=492, Percent_Identity=34.5528455284553, Blast_Score=252, Evalue=7e-67, Organism=Homo sapiens, GI10835121, Length=492, Percent_Identity=34.5528455284553, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI33286418, Length=491, Percent_Identity=33.8085539714868, Blast_Score=246, Evalue=2e-65, Organism=Homo sapiens, GI33286422, Length=491, Percent_Identity=32.7902240325866, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI33286420, Length=491, Percent_Identity=32.7902240325866, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI310128732, Length=289, Percent_Identity=31.1418685121107, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310128730, Length=289, Percent_Identity=31.1418685121107, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=27.0042194092827, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=27.0042194092827, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=25.5813953488372, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1787965, Length=462, Percent_Identity=35.2813852813853, Blast_Score=268, Evalue=6e-73, Organism=Escherichia coli, GI1788160, Length=481, Percent_Identity=37.2141372141372, Blast_Score=265, Evalue=7e-72, Organism=Caenorhabditis elegans, GI17544584, Length=482, Percent_Identity=34.4398340248963, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17506829, Length=486, Percent_Identity=35.1851851851852, Blast_Score=244, Evalue=6e-65, Organism=Caenorhabditis elegans, GI17506831, Length=486, Percent_Identity=35.1851851851852, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI71984406, Length=486, Percent_Identity=35.1851851851852, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI71984413, Length=486, Percent_Identity=35.1851851851852, Blast_Score=244, Evalue=8e-65, Organism=Saccharomyces cerevisiae, GI6324923, Length=491, Percent_Identity=34.826883910387, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6319279, Length=485, Percent_Identity=33.4020618556701, Blast_Score=232, Evalue=1e-61, Organism=Drosophila melanogaster, GI24648964, Length=484, Percent_Identity=33.8842975206612, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI28571814, Length=484, Percent_Identity=33.8842975206612, Blast_Score=264, Evalue=1e-70, Organism=Drosophila melanogaster, GI24648966, Length=408, Percent_Identity=34.3137254901961, Blast_Score=221, Evalue=1e-57, Organism=Drosophila melanogaster, GI24581235, Length=490, Percent_Identity=30.2040816326531, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI24646914, Length=256, Percent_Identity=36.71875, Blast_Score=144, Evalue=2e-34,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 51750; Mature: 51750
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRARKVKIIATLGPSSFSISMIEKLFMAGADVFRLNMSHTDRETMVDLVQRIRKVEKTV CCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH RRPIGILVDLQGPKLRVGCFDKGQEDLRIGQSFTLDDRDILGDAQRVFFPHGEVLAAIKP CCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCHHHHCCCCEEECCCCCEEEEECC GDRLLIDDGKLELLAQVCDGHSVQCLVVAGNRISDRKGVSLPDTVLPFGPMTLKDKADLQ CCEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AVLEQPVDWVALSFIQRPEDIIAVRALTKSKVSLMAKIEKPQALEHIEEIIDVADGIMIA HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEE RGDLGVEMPLERVPAIQMELIKACRLAGKPVVVATQMLESMITSSVPTRAEVSDVATAVY ECCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHE TGTDAVMLSAESASGRYPEEAVLMMDRIAQQIEQDQTYAAQVGAQHPAPESTGTDAISLA ECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ARQIAETLQLTAIVAYTASGTTGVRTSRERPNRPIIALSPIVKTARRLALVWGLHCVVTE HHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEEEEEEC DARDLEDMVDRAAAIAFQEGFCQGGDRFLVTAGVPLGTPGATNLLRIASVSQDGTKGV CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHEEEEEECCCCCCCCC >Mature Secondary Structure MKRARKVKIIATLGPSSFSISMIEKLFMAGADVFRLNMSHTDRETMVDLVQRIRKVEKTV CCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH RRPIGILVDLQGPKLRVGCFDKGQEDLRIGQSFTLDDRDILGDAQRVFFPHGEVLAAIKP CCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCHHHHCCCCEEECCCCCEEEEECC GDRLLIDDGKLELLAQVCDGHSVQCLVVAGNRISDRKGVSLPDTVLPFGPMTLKDKADLQ CCEEEEECCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH AVLEQPVDWVALSFIQRPEDIIAVRALTKSKVSLMAKIEKPQALEHIEEIIDVADGIMIA HHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEE RGDLGVEMPLERVPAIQMELIKACRLAGKPVVVATQMLESMITSSVPTRAEVSDVATAVY ECCCCCCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHE TGTDAVMLSAESASGRYPEEAVLMMDRIAQQIEQDQTYAAQVGAQHPAPESTGTDAISLA ECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH ARQIAETLQLTAIVAYTASGTTGVRTSRERPNRPIIALSPIVKTARRLALVWGLHCVVTE HHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHEEEEEEC DARDLEDMVDRAAAIAFQEGFCQGGDRFLVTAGVPLGTPGATNLLRIASVSQDGTKGV CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA