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The map label for this gene is rsmI [H]

Identifier: 49475950

GI number: 49475950

Start: 1375991

End: 1376878

Strand: Reverse

Name: rsmI [H]

Synonym: BH12360

Alternate gene names: 49475950

Gene position: 1376878-1375991 (Counterclockwise)

Preceding gene: 49475951

Following gene: 49475949

Centisome position: 71.3

GC content: 41.44

Gene sequence:

>888_bases
ATGCGTGAAAGAGCATATTTTATAGGTGCTCATGCTTATTCTGCACCTATTATAGAACCAGCGCTTTATCTTGTTGCAAC
GCCTATAGGAAATCTTGCAGATATCACTCTTCGTGCTTTACAAGTGCTTGCAGGAGTTGATATTCTAGCGTGTGAGGATA
CGCGGGTAACGCGTGTTTTGTTGGAACGCTACGGTATTCAGAAAAAAACCTTTCTTTATCATGAATATAATGCACAAAAA
GCAGGACCCAAGTTATTAACAGCTTTGGAAGAAAATAAAGCTATAGCGCTTGTATCCGATGCGGGAACACCGCTTATTTC
TGATCCTGGATTTCGACTGGTAGAAGAAGCACGCAAAGCTGGTCACAAAATCGTTCCAATTCCTGGCGCATCAGCTCTTT
TAGCAGCTCTTGTTGCGACGGGGCTTCCGACTGATAGTTTTTTCTTTGCTGGTTTTTTGAGTGCGCGTAAGGCACAACGC
CAAAAGCGATTGGAACAATTAAAAACCATCCCTGCGACTTTGGTGTTTTATGAATCACCCCATCGTCTTGTCGAGACTTT
ACAGGATATGGTTGCTCTTTTTTCGGCTGATCGTCCTGCTGCAATCTGCCGTGAATTAACAAAAAAGTTTGAAACAGTCG
ATGTTTCCAATTTAGGTAATTTGTCGGAGAGTTACGGGAAACAAGCCCATATTCGTGGGGAAATTGTTGTGCTTGTTGGA
CAAAAACTTTCCTCTTTGAATGTGATGAGTGATCACGAAATTGATGAAATGTTATTAGAATTGGCGCGTACTTATTCTGC
TGCTAAGGCGGCTTCTTTGGCGTCAAAGAAAACGGGCTTAAAAAAGCAAGAACTTTTTCAGCGGTTAAATTTTTTAAAAG
ATGCATAA

Upstream 100 bases:

>100_bases
GGGGGCGGTAAAGAAGATTTTGGTGGATATAGCTTAATTAGGTGCAAAGCTTATAGCCACGAGTTGAGGGAGAGAGGTTA
AGTGGATATGAAAGAAAAAC

Downstream 100 bases:

>100_bases
AACAATGGGAAAGACTACGCAAAAAGGACATAGACAAAAGTCTTTCTATCGAGGCGTTCGTGCAGAAAAATGGGCAGCTT
GGTGGTTGCGTTGCAAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRERAYFIGAHAYSAPIIEPALYLVATPIGNLADITLRALQVLAGVDILACEDTRVTRVLLERYGIQKKTFLYHEYNAQK
AGPKLLTALEENKAIALVSDAGTPLISDPGFRLVEEARKAGHKIVPIPGASALLAALVATGLPTDSFFFAGFLSARKAQR
QKRLEQLKTIPATLVFYESPHRLVETLQDMVALFSADRPAAICRELTKKFETVDVSNLGNLSESYGKQAHIRGEIVVLVG
QKLSSLNVMSDHEIDEMLLELARTYSAAKAASLASKKTGLKKQELFQRLNFLKDA

Sequences:

>Translated_295_residues
MRERAYFIGAHAYSAPIIEPALYLVATPIGNLADITLRALQVLAGVDILACEDTRVTRVLLERYGIQKKTFLYHEYNAQK
AGPKLLTALEENKAIALVSDAGTPLISDPGFRLVEEARKAGHKIVPIPGASALLAALVATGLPTDSFFFAGFLSARKAQR
QKRLEQLKTIPATLVFYESPHRLVETLQDMVALFSADRPAAICRELTKKFETVDVSNLGNLSESYGKQAHIRGEIVVLVG
QKLSSLNVMSDHEIDEMLLELARTYSAAKAASLASKKTGLKKQELFQRLNFLKDA
>Mature_295_residues
MRERAYFIGAHAYSAPIIEPALYLVATPIGNLADITLRALQVLAGVDILACEDTRVTRVLLERYGIQKKTFLYHEYNAQK
AGPKLLTALEENKAIALVSDAGTPLISDPGFRLVEEARKAGHKIVPIPGASALLAALVATGLPTDSFFFAGFLSARKAQR
QKRLEQLKTIPATLVFYESPHRLVETLQDMVALFSADRPAAICRELTKKFETVDVSNLGNLSESYGKQAHIRGEIVVLVG
QKLSSLNVMSDHEIDEMLLELARTYSAAKAASLASKKTGLKKQELFQRLNFLKDA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=232, Percent_Identity=46.9827586206897, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32380; Mature: 32380

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERAYFIGAHAYSAPIIEPALYLVATPIGNLADITLRALQVLAGVDILACEDTRVTRVL
CCCCEEEEECHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHH
LERYGIQKKTFLYHEYNAQKAGPKLLTALEENKAIALVSDAGTPLISDPGFRLVEEARKA
HHHHCCCHHEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHC
GHKIVPIPGASALLAALVATGLPTDSFFFAGFLSARKAQRQKRLEQLKTIPATLVFYESP
CCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH
HRLVETLQDMVALFSADRPAAICRELTKKFETVDVSNLGNLSESYGKQAHIRGEIVVLVG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHCCCEECCCEEEEEEC
QKLSSLNVMSDHEIDEMLLELARTYSAAKAASLASKKTGLKKQELFQRLNFLKDA
CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRERAYFIGAHAYSAPIIEPALYLVATPIGNLADITLRALQVLAGVDILACEDTRVTRVL
CCCCEEEEECHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHH
LERYGIQKKTFLYHEYNAQKAGPKLLTALEENKAIALVSDAGTPLISDPGFRLVEEARKA
HHHHCCCHHEEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHC
GHKIVPIPGASALLAALVATGLPTDSFFFAGFLSARKAQRQKRLEQLKTIPATLVFYESP
CCEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCH
HRLVETLQDMVALFSADRPAAICRELTKKFETVDVSNLGNLSESYGKQAHIRGEIVVLVG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHCCCCHHHHCCCEECCCEEEEEEC
QKLSSLNVMSDHEIDEMLLELARTYSAAKAASLASKKTGLKKQELFQRLNFLKDA
CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]