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The map label for this gene is yraN [C]

Identifier: 49475949

GI number: 49475949

Start: 1375606

End: 1375986

Strand: Reverse

Name: yraN [C]

Synonym: BH12350

Alternate gene names: 49475949

Gene position: 1375986-1375606 (Counterclockwise)

Preceding gene: 49475950

Following gene: 49475948

Centisome position: 71.26

GC content: 44.36

Gene sequence:

>381_bases
ATGGGAAAGACTACGCAAAAAGGACATAGACAAAAGTCTTTCTATCGAGGCGTTCGTGCAGAAAAATGGGCAGCTTGGTG
GTTGCGTTGCAAAGGGTTTCATATTGCTGAAATTCGTTTTAAAACGAAATGCGGTGAAATTGATTTAATTGCGCGGCGTG
GAAATCTTGTTTTAATCGTTGAGGTAAAAGCGCGTTCAACACTAGCTGAAGCGATGGCTGCTGTTTCTCGGGTGAATGAG
AGGCGCATTGAGGCCGCGGCCGATATTTGGTTGGCACGGCAAAAAGATCGTGCTCTTTTATGTGTACGCTTCGATTTGAT
CGCCATTTTACCGTGGCGTTGGCCGCAGCATATTCCAGCATTTTTTATGTCTAATAAATAA

Upstream 100 bases:

>100_bases
TATTCTGCTGCTAAGGCGGCTTCTTTGGCGTCAAAGAAAACGGGCTTAAAAAAGCAAGAACTTTTTCAGCGGTTAAATTT
TTTAAAAGATGCATAAAACA

Downstream 100 bases:

>100_bases
GAGTTTCTCTATCGTTTTAACCATGGTAGATGGAAAATATCTTGTTTATACACATGCGTTAGAAAAAGTGCCTAATAATT
TGAGCGCTATGAGGAGTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MGKTTQKGHRQKSFYRGVRAEKWAAWWLRCKGFHIAEIRFKTKCGEIDLIARRGNLVLIVEVKARSTLAEAMAAVSRVNE
RRIEAAADIWLARQKDRALLCVRFDLIAILPWRWPQHIPAFFMSNK

Sequences:

>Translated_126_residues
MGKTTQKGHRQKSFYRGVRAEKWAAWWLRCKGFHIAEIRFKTKCGEIDLIARRGNLVLIVEVKARSTLAEAMAAVSRVNE
RRIEAAADIWLARQKDRALLCVRFDLIAILPWRWPQHIPAFFMSNK
>Mature_125_residues
GKTTQKGHRQKSFYRGVRAEKWAAWWLRCKGFHIAEIRFKTKCGEIDLIARRGNLVLIVEVKARSTLAEAMAAVSRVNER
RIEAAADIWLARQKDRALLCVRFDLIAILPWRWPQHIPAFFMSNK

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1235_BARHE (Q6G2H1)

Other databases:

- EMBL:   BX897699
- RefSeq:   YP_033990.1
- ProteinModelPortal:   Q6G2H1
- GeneID:   2866116
- GenomeReviews:   BX897699_GR
- KEGG:   bhe:BH12350
- HOGENOM:   HBG710155
- OMA:   DIWLARQ
- ProtClustDB:   PRK12497
- BioCyc:   BHEN283166:BH12350-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14692; Mature: 14560

Theoretical pI: Translated: 11.39; Mature: 11.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTTQKGHRQKSFYRGVRAEKWAAWWLRCKGFHIAEIRFKTKCGEIDLIARRGNLVLIV
CCCCCCCCHHHHHHHCCCCCCHHHEEHEEECCCEEEEEEEECCCCCEEEEEECCCEEEEE
EVKARSTLAEAMAAVSRVNERRIEAAADIWLARQKDRALLCVRFDLIAILPWRWPQHIPA
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEEEEECCCCCCCCCC
FFMSNK
EEECCC
>Mature Secondary Structure 
GKTTQKGHRQKSFYRGVRAEKWAAWWLRCKGFHIAEIRFKTKCGEIDLIARRGNLVLIV
CCCCCCCHHHHHHHCCCCCCHHHEEHEEECCCEEEEEEEECCCCCEEEEEECCCEEEEE
EVKARSTLAEAMAAVSRVNERRIEAAADIWLARQKDRALLCVRFDLIAILPWRWPQHIPA
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEEEEEEEEECCCCCCCCCC
FFMSNK
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA