| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475925
Identifier: 49475925
GI number: 49475925
Start: 1343316
End: 1343954
Strand: Reverse
Name: 49475925
Synonym: BH12060
Alternate gene names: NA
Gene position: 1343954-1343316 (Counterclockwise)
Preceding gene: 49475928
Following gene: 49475923
Centisome position: 69.6
GC content: 38.5
Gene sequence:
>639_bases ATGACGCTAGCTGTTTCTTTGGAGTCTACCGATTTGGCTGCTTTACTTTGTAGCCGTATTTGCCATGATTTGATTTCACC TGTTGGTGCTATTCAAAATGCTATGGAGCTCTATGATGAAGGAGGAGCTGAAGAAGATGCTTTGCAATTGGTGCGTTGGT CTGTTGCAAGCGCTTCTGCACGTCTTCAATTTGCCCGATTGGCTTTTGGTTTTGCAGGAACGAGTAGAGGACAAATAGAT ACACGTTCCGTTGAACAGGTTGCTCAACAATATATGAAGGAAGAAAAAGCAACTTTAAAATGGCAAATTCCTGCTTTGCT TTTACCCAAAAATGAAGTCAAACTTTTGCTTAATTTGTTATTAATTGCAAATGCAACAGTTTCGCGTGGGGGTGAAATCG TTGTTATGATTGTGCAGGGTGAGAATCAACATTCTTTTCGGTTTGAGATTTGCGGTAAAACTCTCCGTATTCCTTCTCAT TTTATTGCGCTATATAATGGGGAAATTCAAGAAGAATTTATCGATGCACATGTTATCCAGTTTTATTACACAATGTTACT CGCTCAGATGACAGGTATGAAAATAAATATCAATGAAACTGACAGTTGTGTTATTTTGGAAAGTACGAAGAGACTTTGA
Upstream 100 bases:
>100_bases ATTTAGCGTGATTGTTAAAGTTTCTATATGTATGCATTGGATGTTAAGAGTTTTCTTTTAAAAAAGAGCTTGTTTTTAAA TTTAGGAGTTCTCAATCATT
Downstream 100 bases:
>100_bases TAAAATATAAGCACTTAAAATATGCTGGGAAAGAGAGCTTAGATTGTTTCCGTGAGTGATAAGATTATATTCGCAAACAG GAAGGGTGGGGACTTTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTLAVSLESTDLAALLCSRICHDLISPVGAIQNAMELYDEGGAEEDALQLVRWSVASASARLQFARLAFGFAGTSRGQID TRSVEQVAQQYMKEEKATLKWQIPALLLPKNEVKLLLNLLLIANATVSRGGEIVVMIVQGENQHSFRFEICGKTLRIPSH FIALYNGEIQEEFIDAHVIQFYYTMLLAQMTGMKININETDSCVILESTKRL
Sequences:
>Translated_212_residues MTLAVSLESTDLAALLCSRICHDLISPVGAIQNAMELYDEGGAEEDALQLVRWSVASASARLQFARLAFGFAGTSRGQID TRSVEQVAQQYMKEEKATLKWQIPALLLPKNEVKLLLNLLLIANATVSRGGEIVVMIVQGENQHSFRFEICGKTLRIPSH FIALYNGEIQEEFIDAHVIQFYYTMLLAQMTGMKININETDSCVILESTKRL >Mature_211_residues TLAVSLESTDLAALLCSRICHDLISPVGAIQNAMELYDEGGAEEDALQLVRWSVASASARLQFARLAFGFAGTSRGQIDT RSVEQVAQQYMKEEKATLKWQIPALLLPKNEVKLLLNLLLIANATVSRGGEIVVMIVQGENQHSFRFEICGKTLRIPSHF IALYNGEIQEEFIDAHVIQFYYTMLLAQMTGMKININETDSCVILESTKRL
Specific function: Unknown
COG id: COG5385
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23595; Mature: 23463
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLAVSLESTDLAALLCSRICHDLISPVGAIQNAMELYDEGGAEEDALQLVRWSVASASA CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RLQFARLAFGFAGTSRGQIDTRSVEQVAQQYMKEEKATLKWQIPALLLPKNEVKLLLNLL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCEEEECCHHHHHHHHHH LIANATVSRGGEIVVMIVQGENQHSFRFEICGKTLRIPSHFIALYNGEIQEEFIDAHVIQ HHHCCHHCCCCCEEEEEEECCCCCCEEEEECCCEECCCHHEEEEECCCHHHHHHHHHHHH FYYTMLLAQMTGMKININETDSCVILESTKRL HHHHHHHHHHCCCEEEECCCCCEEEEECCCCC >Mature Secondary Structure TLAVSLESTDLAALLCSRICHDLISPVGAIQNAMELYDEGGAEEDALQLVRWSVASASA EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RLQFARLAFGFAGTSRGQIDTRSVEQVAQQYMKEEKATLKWQIPALLLPKNEVKLLLNLL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCEEEECCHHHHHHHHHH LIANATVSRGGEIVVMIVQGENQHSFRFEICGKTLRIPSHFIALYNGEIQEEFIDAHVIQ HHHCCHHCCCCCEEEEEEECCCCCCEEEEECCCEECCCHHEEEEECCCHHHHHHHHHHHH FYYTMLLAQMTGMKININETDSCVILESTKRL HHHHHHHHHHCCCEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA