Click here to switch to the map view.

The map label for this gene is 49475923

Identifier: 49475923

GI number: 49475923

Start: 1341024

End: 1341410

Strand: Reverse

Name: 49475923

Synonym: BH12040

Alternate gene names: NA

Gene position: 1341410-1341024 (Counterclockwise)

Preceding gene: 49475925

Following gene: 49475921

Centisome position: 69.47

GC content: 44.44

Gene sequence:

>387_bases
ATGAAGCCACGGGAAAGTATGGTGCGATTGAAGATGTTTCAAGTGCGTGGGAAACGCCGTGAAATCGCACAGCTTGAGAT
GATGATCGCAGAATTTGAGCGAATGGTGTTAGAGTTGGAAGCACAAATTGTTCATGAAGAATGTAAATCTGGAAACAGTG
ACGTTCACCATTTTGCTTATTCTGCTTTGGCTCGTGCGGCGCGGCAAAGGCGCGATAATCTTATAAATTCGATTCGTGAT
TTGCAGCTTCAGAAAACAAATGCTGAAATTGCTCTCCATGAAGTCACTACAGAGTTACAACGTGCACAACTTTTGGAGGC
ACGGGAAAATGGCGGTGTAGCAGGTGAGAAGGATATCTTCATGCAATCTCGTTCGATGACTGGATAA

Upstream 100 bases:

>100_bases
TTAAAAATGGACTTTTTTCGTCAGAAAGAGTGTAACTAAAAATTATACGTTAAGGGTGCGAATACAAGTTTTGGGTTGGC
GCAAACAAGGAGTAGTGAGT

Downstream 100 bases:

>100_bases
TCTTAAAACGTTCAGGAGAAAAATAGAAAACTTTACTTAAGTATGTTGCTCCTTTTCTAAAATGAAAATGTCGTTTGAAG
GTCAATTCTTTGAGAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Flagellar Export FliJ; Flagelar FliJ Protein

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MKPRESMVRLKMFQVRGKRREIAQLEMMIAEFERMVLELEAQIVHEECKSGNSDVHHFAYSALARAARQRRDNLINSIRD
LQLQKTNAEIALHEVTTELQRAQLLEARENGGVAGEKDIFMQSRSMTG

Sequences:

>Translated_128_residues
MKPRESMVRLKMFQVRGKRREIAQLEMMIAEFERMVLELEAQIVHEECKSGNSDVHHFAYSALARAARQRRDNLINSIRD
LQLQKTNAEIALHEVTTELQRAQLLEARENGGVAGEKDIFMQSRSMTG
>Mature_128_residues
MKPRESMVRLKMFQVRGKRREIAQLEMMIAEFERMVLELEAQIVHEECKSGNSDVHHFAYSALARAARQRRDNLINSIRD
LQLQKTNAEIALHEVTTELQRAQLLEARENGGVAGEKDIFMQSRSMTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14769; Mature: 14769

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRESMVRLKMFQVRGKRREIAQLEMMIAEFERMVLELEAQIVHEECKSGNSDVHHFAY
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SALARAARQRRDNLINSIRDLQLQKTNAEIALHEVTTELQRAQLLEARENGGVAGEKDIF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
MQSRSMTG
HHHCCCCC
>Mature Secondary Structure
MKPRESMVRLKMFQVRGKRREIAQLEMMIAEFERMVLELEAQIVHEECKSGNSDVHHFAY
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SALARAARQRRDNLINSIRDLQLQKTNAEIALHEVTTELQRAQLLEARENGGVAGEKDIF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
MQSRSMTG
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA