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The map label for this gene is recN [H]

Identifier: 49475846

GI number: 49475846

Start: 1228280

End: 1229941

Strand: Reverse

Name: recN [H]

Synonym: BH11150

Alternate gene names: 49475846

Gene position: 1229941-1228280 (Counterclockwise)

Preceding gene: 49475847

Following gene: 49475845

Centisome position: 63.69

GC content: 43.68

Gene sequence:

>1662_bases
ATGTTGATACAGCTTTCGATTCATAATATTGTCTTGATCGAAACGCTCGATATTCATTTTAGAGCGGGTTTGTCTGTTTT
AACTGGAGAAACGGGCGCGGGGAAGTCTATTTTACTTGATGCTTTGTCACTGGCTCTTGGGGGACGGGGTGATGCTTCTC
TTGTACGTCATGGTGTTGACCGCGGGCAGGTGACAGCTGTTTTTGATGTGCCTGTTTCGCATTCTGTGCGTCAGCTTATC
CGTGAGAATGGTTTTGATGATGAAGGCGATATTATTTTACGGCGTGTGCAATTAAGTGATGGTCGTAGTCGTGTTTTTAT
CAATGATCAGGTAGCTAGTGTTGCATTGATGCGTCATGTTGGACGTCAGTTGGTTGAAATTCACGGACAGCATGATAATC
GCGCACTTGTTGATGTTGATACGCATCGCCAATTACTAGATGCTTTTGGTGGACTTGAGGATGAGACAGAAAATTTGCGT
CAGTGTTATCGGATATGGCGTGAATTTGAAAAGCGTTTGCAGCAACAGCGTTTGAAAGTAGAGAATGCTTTACGTGAGGC
TGATTATCTTCGTGCGTGCGTTCAAGAACTTGAAAAGCTCGATTTTCAAGTTGGTGAAGAGGATGCCCTTTCTCTTCGTC
GTGCAGATATGCTTAAATTAGAAAAAATAGCGACGGATATTAAGGAAGCTGATGATCTTTTAACTGGTCCAAAATCGCCA
ATTCCAGTTCTTTCTAATTTGGTAAGACGTTTGGAACGCAAAATTCCCGAGGCGCAAGAGCTTATTGCACCTGTCGTTAA
CTCGATTGATGAGGCACTTCATGCACTTGCAACAGCACAAGAAGGTATTGAAGCAGCAATGCGGGCATTGGATTTTGAAC
CTGGTGAATTGGAACAGATAGAGGAGCGCCTTTTTGCTCTTCGGGGCTTTGCTCGTAAGTACCAAGTTTCTGCGGATGAA
TTAATACAGTTACGTGATAAAATGGATGCAGAACTTGCTGATTTTGAGCAGGATCAGAACACATTGGTGCATCTCGAGGA
TGAAGTAGAGCAGGCACAAAAGAACTATGATACATTAGCACAAGCACTTTCAATAAAGCGTCGAGAAGTAGCAAAGCACT
TGTCTGAAAGTGTTATGGCTGAGTTACCAGCATTGAAATTGGAAAAGGCAGAGTTTATTGTTGAAATGCAAAGTGATGTT
GAAAGACGCAGTGCAGAAGGGATAGATCGTGTTGAATATTGGGTTCGGACAAATCCTGGGACCCGTGCAGGACCAATGCT
CAGTGTAGCTTCTGGTGGTGAACTGTCTCGTTTTTTATTGGCATTAAAGGTTGTTTTGTCTGATCGTGGATCAGCTCCTA
CGCTAATCTTTGATGAAATTGATACAGGCGTTGGTGGAGCTGTTGCTGCTGCTATTGGGCAAAGGTTGCGGCGTTTATCA
GAAAATATTCAGGTTTTTGCTATTACGCATGCGCCTCAGGTAGCATCTAAAGCACACAGCCATTTTCTTATTTCAAAGGA
GGAGAGTGATGATAAAGGCCGCTTTGTTACAGCTGTCCATAAAATGGAAGAGCGTGAGCGTGCAGAAGAAATTGCCCGTA
TGTTAGCAGGAGAGCAGATTACTAAAGAGGCGCGTGCAGCTGCTCAAAAACTTTTGGCATAG

Upstream 100 bases:

>100_bases
TAATCTCTTGCAAAAGAATAGCATATCACCACGGGAGCATAAATCTTCTTGGATCTCACAGGCTTTAGGTGGTGATAAAA
GTAAGGCACGTTGATTCTCT

Downstream 100 bases:

>100_bases
AGATGATTGATTAAATGGTAAAAATGTTGCTTATGAATTATATCACTGGCGAGCATGTCTTCATTTGGATTCTGTGCGTG
ATAAAGAATTGAGATTATTA

Product: DNA repair protein recn

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLIQLSIHNIVLIETLDIHFRAGLSVLTGETGAGKSILLDALSLALGGRGDASLVRHGVDRGQVTAVFDVPVSHSVRQLI
RENGFDDEGDIILRRVQLSDGRSRVFINDQVASVALMRHVGRQLVEIHGQHDNRALVDVDTHRQLLDAFGGLEDETENLR
QCYRIWREFEKRLQQQRLKVENALREADYLRACVQELEKLDFQVGEEDALSLRRADMLKLEKIATDIKEADDLLTGPKSP
IPVLSNLVRRLERKIPEAQELIAPVVNSIDEALHALATAQEGIEAAMRALDFEPGELEQIEERLFALRGFARKYQVSADE
LIQLRDKMDAELADFEQDQNTLVHLEDEVEQAQKNYDTLAQALSIKRREVAKHLSESVMAELPALKLEKAEFIVEMQSDV
ERRSAEGIDRVEYWVRTNPGTRAGPMLSVASGGELSRFLLALKVVLSDRGSAPTLIFDEIDTGVGGAVAAAIGQRLRRLS
ENIQVFAITHAPQVASKAHSHFLISKEESDDKGRFVTAVHKMEERERAEEIARMLAGEQITKEARAAAQKLLA

Sequences:

>Translated_553_residues
MLIQLSIHNIVLIETLDIHFRAGLSVLTGETGAGKSILLDALSLALGGRGDASLVRHGVDRGQVTAVFDVPVSHSVRQLI
RENGFDDEGDIILRRVQLSDGRSRVFINDQVASVALMRHVGRQLVEIHGQHDNRALVDVDTHRQLLDAFGGLEDETENLR
QCYRIWREFEKRLQQQRLKVENALREADYLRACVQELEKLDFQVGEEDALSLRRADMLKLEKIATDIKEADDLLTGPKSP
IPVLSNLVRRLERKIPEAQELIAPVVNSIDEALHALATAQEGIEAAMRALDFEPGELEQIEERLFALRGFARKYQVSADE
LIQLRDKMDAELADFEQDQNTLVHLEDEVEQAQKNYDTLAQALSIKRREVAKHLSESVMAELPALKLEKAEFIVEMQSDV
ERRSAEGIDRVEYWVRTNPGTRAGPMLSVASGGELSRFLLALKVVLSDRGSAPTLIFDEIDTGVGGAVAAAIGQRLRRLS
ENIQVFAITHAPQVASKAHSHFLISKEESDDKGRFVTAVHKMEERERAEEIARMLAGEQITKEARAAAQKLLA
>Mature_553_residues
MLIQLSIHNIVLIETLDIHFRAGLSVLTGETGAGKSILLDALSLALGGRGDASLVRHGVDRGQVTAVFDVPVSHSVRQLI
RENGFDDEGDIILRRVQLSDGRSRVFINDQVASVALMRHVGRQLVEIHGQHDNRALVDVDTHRQLLDAFGGLEDETENLR
QCYRIWREFEKRLQQQRLKVENALREADYLRACVQELEKLDFQVGEEDALSLRRADMLKLEKIATDIKEADDLLTGPKSP
IPVLSNLVRRLERKIPEAQELIAPVVNSIDEALHALATAQEGIEAAMRALDFEPGELEQIEERLFALRGFARKYQVSADE
LIQLRDKMDAELADFEQDQNTLVHLEDEVEQAQKNYDTLAQALSIKRREVAKHLSESVMAELPALKLEKAEFIVEMQSDV
ERRSAEGIDRVEYWVRTNPGTRAGPMLSVASGGELSRFLLALKVVLSDRGSAPTLIFDEIDTGVGGAVAAAIGQRLRRLS
ENIQVFAITHAPQVASKAHSHFLISKEESDDKGRFVTAVHKMEERERAEEIARMLAGEQITKEARAAAQKLLA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=568, Percent_Identity=33.0985915492958, Blast_Score=299, Evalue=3e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61771; Mature: 61771

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQLSIHNIVLIETLDIHFRAGLSVLTGETGAGKSILLDALSLALGGRGDASLVRHGVD
CEEEEEECCEEEEEEECHHHHCCCHHEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCC
RGQVTAVFDVPVSHSVRQLIRENGFDDEGDIILRRVQLSDGRSRVFINDQVASVALMRHV
CCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEECHHHHHHHHHHHH
GRQLVEIHGQHDNRALVDVDTHRQLLDAFGGLEDETENLRQCYRIWREFEKRLQQQRLKV
HHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ENALREADYLRACVQELEKLDFQVGEEDALSLRRADMLKLEKIATDIKEADDLLTGPKSP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IPVLSNLVRRLERKIPEAQELIAPVVNSIDEALHALATAQEGIEAAMRALDFEPGELEQI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EERLFALRGFARKYQVSADELIQLRDKMDAELADFEQDQNTLVHLEDEVEQAQKNYDTLA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH
QALSIKRREVAKHLSESVMAELPALKLEKAEFIVEMQSDVERRSAEGIDRVEYWVRTNPG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCC
TRAGPMLSVASGGELSRFLLALKVVLSDRGSAPTLIFDEIDTGVGGAVAAAIGQRLRRLS
CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
ENIQVFAITHAPQVASKAHSHFLISKEESDDKGRFVTAVHKMEERERAEEIARMLAGEQI
CCCEEEEEECCCHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEARAAAQKLLA
HHHHHHHHHHHCC
>Mature Secondary Structure
MLIQLSIHNIVLIETLDIHFRAGLSVLTGETGAGKSILLDALSLALGGRGDASLVRHGVD
CEEEEEECCEEEEEEECHHHHCCCHHEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCC
RGQVTAVFDVPVSHSVRQLIRENGFDDEGDIILRRVQLSDGRSRVFINDQVASVALMRHV
CCCEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEECHHHHHHHHHHHH
GRQLVEIHGQHDNRALVDVDTHRQLLDAFGGLEDETENLRQCYRIWREFEKRLQQQRLKV
HHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ENALREADYLRACVQELEKLDFQVGEEDALSLRRADMLKLEKIATDIKEADDLLTGPKSP
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IPVLSNLVRRLERKIPEAQELIAPVVNSIDEALHALATAQEGIEAAMRALDFEPGELEQI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EERLFALRGFARKYQVSADELIQLRDKMDAELADFEQDQNTLVHLEDEVEQAQKNYDTLA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH
QALSIKRREVAKHLSESVMAELPALKLEKAEFIVEMQSDVERRSAEGIDRVEYWVRTNPG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCC
TRAGPMLSVASGGELSRFLLALKVVLSDRGSAPTLIFDEIDTGVGGAVAAAIGQRLRRLS
CCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH
ENIQVFAITHAPQVASKAHSHFLISKEESDDKGRFVTAVHKMEERERAEEIARMLAGEQI
CCCEEEEEECCCHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKEARAAAQKLLA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA