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The map label for this gene is comL [C]

Identifier: 49475847

GI number: 49475847

Start: 1229948

End: 1230841

Strand: Reverse

Name: comL [C]

Synonym: BH11160

Alternate gene names: 49475847

Gene position: 1230841-1229948 (Counterclockwise)

Preceding gene: 49475848

Following gene: 49475846

Centisome position: 63.74

GC content: 39.49

Gene sequence:

>894_bases
ATGATAAAATCTCATGTATCTATTAAAAATGTAGCATACAGGAAATCTAACATCTTACGCAAGGTATTAGGGATGATATT
TTTGGGGAGCACCTGCATATTAGCGGGTTGTTTATTTAAAGAAAAAAATACCCTTGATCCATCTGCATATGTTTTAAAAA
TAGATCCGCCAGATGTTCTCTATAATCAGGCACTTGCTAGTCTTGAGAGTGGGCGGCTTGCGGACGCATCGAAAAAGTTT
CTGATAATTGAAAAGCAATATGCTTATACGGATTGGGGTCGTAAATCACTGGTGATGGGTGCTTTTACGAATTACCGACT
CGAAAAGTATGATGATTCTATTAGTATGGCTCAGCGCTATATTACTCTTTATCCAGAGGCAGATGATGCTGCTTATGCTT
ATTATATTATCGGTCTTTCTTCTTTTCGTCGGATTCCTGATGTTACACGGGATCAACGTGATACGAAACGTGCTATTGCT
GCTATGCAGCTTCTCATAGAGCGCTATCCGAACTCTGAATATGTTAAGGATGCTAAAGCTAAAATACGGTTTGGGAGAGA
ACAGTTGGCTGGTAAAGAGATGCAGGTTGGCCGTTATTATGAAGAAGGGCGACGTTATCTTGCTGCAAGTAGAAGATTTC
GTAAAGTGGTTGAGGAGTACTCCGATACAAATCAAATTGAAGAGGCGCTTTTTCGTTTGACGGAAGTTAATCTTGCTCTT
GGTTTAACTTTGGAAGCCCAGACAGCTGCTGCTATTTTAGGACGTAATTATCCCAAAAGTGAATGGTATAAATTTTCTTA
TAATCTCTTGCAAAAGAATAGCATATCACCACGGGAGCATAAATCTTCTTGGATCTCACAGGCTTTAGGTGGTGATAAAA
GTAAGGCACGTTGA

Upstream 100 bases:

>100_bases
GCTATTAAATTGGTTAGTGGCTTTTGACACAATATGGTATAAAAATCTTTAATAAACAATTTTTGCTACAAGGTGACATT
CTCTGGAGGCCAGAAAAATT

Downstream 100 bases:

>100_bases
TTCTCTATGTTGATACAGCTTTCGATTCATAATATTGTCTTGATCGAAACGCTCGATATTCATTTTAGAGCGGGTTTGTC
TGTTTTAACTGGAGAAACGG

Product: competence lipoprotein comL precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIKSHVSIKNVAYRKSNILRKVLGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDVLYNQALASLESGRLADASKKF
LIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRYITLYPEADDAAYAYYIIGLSSFRRIPDVTRDQRDTKRAIA
AMQLLIERYPNSEYVKDAKAKIRFGREQLAGKEMQVGRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLAL
GLTLEAQTAAAILGRNYPKSEWYKFSYNLLQKNSISPREHKSSWISQALGGDKSKAR

Sequences:

>Translated_297_residues
MIKSHVSIKNVAYRKSNILRKVLGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDVLYNQALASLESGRLADASKKF
LIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRYITLYPEADDAAYAYYIIGLSSFRRIPDVTRDQRDTKRAIA
AMQLLIERYPNSEYVKDAKAKIRFGREQLAGKEMQVGRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLAL
GLTLEAQTAAAILGRNYPKSEWYKFSYNLLQKNSISPREHKSSWISQALGGDKSKAR
>Mature_297_residues
MIKSHVSIKNVAYRKSNILRKVLGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDVLYNQALASLESGRLADASKKF
LIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRYITLYPEADDAAYAYYIIGLSSFRRIPDVTRDQRDTKRAIA
AMQLLIERYPNSEYVKDAKAKIRFGREQLAGKEMQVGRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLAL
GLTLEAQTAAAILGRNYPKSEWYKFSYNLLQKNSISPREHKSSWISQALGGDKSKAR

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=239, Percent_Identity=25.1046025104602, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34079; Mature: 34079

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSHVSIKNVAYRKSNILRKVLGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHH
YNQALASLESGRLADASKKFLIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRY
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHEEEHHHHCCHHHHHCCHHHHHHHH
ITLYPEADDAAYAYYIIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKA
EEEECCCCCCEEEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KIRFGREQLAGKEMQVGRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLAL
HHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEE
GLTLEAQTAAAILGRNYPKSEWYKFSYNLLQKNSISPREHKSSWISQALGGDKSKAR
EEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIKSHVSIKNVAYRKSNILRKVLGMIFLGSTCILAGCLFKEKNTLDPSAYVLKIDPPDVL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHH
YNQALASLESGRLADASKKFLIIEKQYAYTDWGRKSLVMGAFTNYRLEKYDDSISMAQRY
HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHEEEHHHHCCHHHHHCCHHHHHHHH
ITLYPEADDAAYAYYIIGLSSFRRIPDVTRDQRDTKRAIAAMQLLIERYPNSEYVKDAKA
EEEECCCCCCEEEEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KIRFGREQLAGKEMQVGRYYEEGRRYLAASRRFRKVVEEYSDTNQIEEALFRLTEVNLAL
HHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEE
GLTLEAQTAAAILGRNYPKSEWYKFSYNLLQKNSISPREHKSSWISQALGGDKSKAR
EEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]