| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
Click here to switch to the map view.
The map label for this gene is 49475336
Identifier: 49475336
GI number: 49475336
Start: 628576
End: 629544
Strand: Reverse
Name: 49475336
Synonym: BH05420
Alternate gene names: NA
Gene position: 629544-628576 (Counterclockwise)
Preceding gene: 49475337
Following gene: 49475335
Centisome position: 32.6
GC content: 37.46
Gene sequence:
>969_bases ATGCGAAAGCCTAATTATATGAACAAATTGAAAAAGCATATTCTTACTTTATTTTGTATCGTACCTTTGAGCATAAGCAA CCTGCTGGTTAGTGAAATTCCGTCGACCTTTGCGCAGACTGTCATTGTTGTTACAGTCAATGGCAAACCTATAACAAATT ACGATATTCAAAGACGAGCAGCTTTTCTCAGACTGCAACAAAAGCAAGGAAATCTCTCTGAACAAGCTAAAAATGAACTT ATCAATGAAGTCCTCAAAAATATCGAAATAAAGCGCCGTAATATTGAGGTAAGCAATAATGAAGTTGAGAGTGCTTTTAA AAACTTTGCAGCACAAAATAATATGACTGTTGATCAACTCAACCAGATCCTAATAGACAATGATATCACCGTACAACACT TTAAGGATTACATCCGTGGACAATTAGGATGGGGGCGTCTTGTTAATGCACGTTATCAAGCTGAAACAGGTATGATCAGC GAACAAGAAGCTGTACGCAGAATATTAAAAAATGGTGGTGTCAAACCTTCAACAAATGAGTATACACTACAGCGCATTAT TTTTGTCATTCCTGCGCATCGCCGTTCAGAAATCTTTGAAAGACGCCAAAGAGAAGCGAATAATTTCCGCGCACATTTCC AAGGATGTGCTAACACTTCAAAGCAAGCAAAGGGCATTTTAGATGTTACTGTCCGAAACTTAGGAAAATTTCTTGAACCT CAGCTTCCCAGAGAGTGGGAACAGGCTATTCGTATAACACCTGCTGGAAAAATGACACAATTGCAAGAAACAGCTGATGG AATTGAAGCAATTGCTGTCTGCAAAATAAAAAGAGTTTCTGATGATTATGTTGCTAGACTCATTTTTTCCCTTCAAGATA ATAAACAAAAAAGCCCGCAAGAACTTGAAATCTTAAGTGAGAAATATTTAAAAGAATTGCGGCAGGTGGCGCGTATTAAA AGTTCATAA
Upstream 100 bases:
>100_bases CAAAATCAGATTTATAAGGAGAATTATAGGTGATATAACTTACCATTGTTTTTATAAAAAAAAACGTATATTTTAAGTCA TCGGTGAGAATTGATAAACA
Downstream 100 bases:
>100_bases TGGATGTACTTGTTGTTAGTGGTGGTGATCCTGCCGGAATTGGTCCTGAAATAGCACTAAAAGCGTGGAATTTGCGTGCC ACACGTCAAATTCCGCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: SurA Domain Protein; SurA Domain-Containing Protein; Peptidyl-Prolyl Cis-Trans Isomerase; SurA N- Domain Family; Peptidyl-Prolyl Cis-Trans Isomerase SurA; SurA N-Terminal Domain Family; Ppic-Type Ppiase Domain Protein; SurA N-Terminal Domain Family Protein; SurA Domain; Survival Protein SurA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRKPNYMNKLKKHILTLFCIVPLSISNLLVSEIPSTFAQTVIVVTVNGKPITNYDIQRRAAFLRLQQKQGNLSEQAKNEL INEVLKNIEIKRRNIEVSNNEVESAFKNFAAQNNMTVDQLNQILIDNDITVQHFKDYIRGQLGWGRLVNARYQAETGMIS EQEAVRRILKNGGVKPSTNEYTLQRIIFVIPAHRRSEIFERRQREANNFRAHFQGCANTSKQAKGILDVTVRNLGKFLEP QLPREWEQAIRITPAGKMTQLQETADGIEAIAVCKIKRVSDDYVARLIFSLQDNKQKSPQELEILSEKYLKELRQVARIK SS
Sequences:
>Translated_322_residues MRKPNYMNKLKKHILTLFCIVPLSISNLLVSEIPSTFAQTVIVVTVNGKPITNYDIQRRAAFLRLQQKQGNLSEQAKNEL INEVLKNIEIKRRNIEVSNNEVESAFKNFAAQNNMTVDQLNQILIDNDITVQHFKDYIRGQLGWGRLVNARYQAETGMIS EQEAVRRILKNGGVKPSTNEYTLQRIIFVIPAHRRSEIFERRQREANNFRAHFQGCANTSKQAKGILDVTVRNLGKFLEP QLPREWEQAIRITPAGKMTQLQETADGIEAIAVCKIKRVSDDYVARLIFSLQDNKQKSPQELEILSEKYLKELRQVARIK SS >Mature_322_residues MRKPNYMNKLKKHILTLFCIVPLSISNLLVSEIPSTFAQTVIVVTVNGKPITNYDIQRRAAFLRLQQKQGNLSEQAKNEL INEVLKNIEIKRRNIEVSNNEVESAFKNFAAQNNMTVDQLNQILIDNDITVQHFKDYIRGQLGWGRLVNARYQAETGMIS EQEAVRRILKNGGVKPSTNEYTLQRIIFVIPAHRRSEIFERRQREANNFRAHFQGCANTSKQAKGILDVTVRNLGKFLEP QLPREWEQAIRITPAGKMTQLQETADGIEAIAVCKIKRVSDDYVARLIFSLQDNKQKSPQELEILSEKYLKELRQVARIK SS
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37018; Mature: 37018
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKPNYMNKLKKHILTLFCIVPLSISNLLVSEIPSTFAQTVIVVTVNGKPITNYDIQRRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHH AFLRLQQKQGNLSEQAKNELINEVLKNIEIKRRNIEVSNNEVESAFKNFAAQNNMTVDQL HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCEECCCHHHHHHHHHHHHCCCCCHHHH NQILIDNDITVQHFKDYIRGQLGWGRLVNARYQAETGMISEQEAVRRILKNGGVKPSTNE HHHHHCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCH YTLQRIIFVIPAHRRSEIFERRQREANNFRAHFQGCANTSKQAKGILDVTVRNLGKFLEP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCC QLPREWEQAIRITPAGKMTQLQETADGIEAIAVCKIKRVSDDYVARLIFSLQDNKQKSPQ CCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH ELEILSEKYLKELRQVARIKSS HHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKPNYMNKLKKHILTLFCIVPLSISNLLVSEIPSTFAQTVIVVTVNGKPITNYDIQRRA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHHHHHH AFLRLQQKQGNLSEQAKNELINEVLKNIEIKRRNIEVSNNEVESAFKNFAAQNNMTVDQL HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCEECCCHHHHHHHHHHHHCCCCCHHHH NQILIDNDITVQHFKDYIRGQLGWGRLVNARYQAETGMISEQEAVRRILKNGGVKPSTNE HHHHHCCCCHHHHHHHHHCCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHCCCCCCCCCH YTLQRIIFVIPAHRRSEIFERRQREANNFRAHFQGCANTSKQAKGILDVTVRNLGKFLEP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCC QLPREWEQAIRITPAGKMTQLQETADGIEAIAVCKIKRVSDDYVARLIFSLQDNKQKSPQ CCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHH ELEILSEKYLKELRQVARIKSS HHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA