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The map label for this gene is 49475033

Identifier: 49475033

GI number: 49475033

Start: 297356

End: 297772

Strand: Reverse

Name: 49475033

Synonym: BH02210

Alternate gene names: NA

Gene position: 297772-297356 (Counterclockwise)

Preceding gene: 49475034

Following gene: 49475032

Centisome position: 15.42

GC content: 37.65

Gene sequence:

>417_bases
ATGACCGAGACTAGAAAAAAACCCGATCCTATAGATGTCTATGTCGGAACCCGTATTCGTTTACGTCGTAATATTTTAGG
ACTCACCCAAGAAAAATTGGGTGAAAAGCTAGGTATCACTTTCCAACAAATCCAGAAATATGAAAAAGGGACAAATCGTA
TCGGTGCAAGCCGTCTTCAAGCGATTGCTGAAATTATGGATGTCCCTGTTTCTTACTTTTTTGATAAAGGCGTTGGTACA
CAGCAGGTAGAAGGTTTTGCTGAAAGTGATAATGATTTTATGGACTTTTGTTCTAGCAGTGAAGGAATCCAACTTATGCG
TGCTTTCACGAATATATCCGATTCTAAAGTACGTCGGAAAATCATTGATTTGGCAAAAGCACTTTCTGAAGAAGAAGATT
TAACAAACAAACTATAA

Upstream 100 bases:

>100_bases
GAAAAACTATTACATATTGTTTTATTGTATGATAAATCAACCTCACATAAATCTGACGTTGATTTGGAAGTAAAGTGCTG
GAAATTTAAAGAGTTACATT

Downstream 100 bases:

>100_bases
AATAAAAATTATATCTTTTCTCTCGCTCACCTTATCAATCAACATTGATGATTTGTCATGGGATTGGCAAATAAGGGCAA
TTTTAATATAGAGTTGGTTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTETRKKPDPIDVYVGTRIRLRRNILGLTQEKLGEKLGITFQQIQKYEKGTNRIGASRLQAIAEIMDVPVSYFFDKGVGT
QQVEGFAESDNDFMDFCSSSEGIQLMRAFTNISDSKVRRKIIDLAKALSEEEDLTNKL

Sequences:

>Translated_138_residues
MTETRKKPDPIDVYVGTRIRLRRNILGLTQEKLGEKLGITFQQIQKYEKGTNRIGASRLQAIAEIMDVPVSYFFDKGVGT
QQVEGFAESDNDFMDFCSSSEGIQLMRAFTNISDSKVRRKIIDLAKALSEEEDLTNKL
>Mature_137_residues
TETRKKPDPIDVYVGTRIRLRRNILGLTQEKLGEKLGITFQQIQKYEKGTNRIGASRLQAIAEIMDVPVSYFFDKGVGTQ
QVEGFAESDNDFMDFCSSSEGIQLMRAFTNISDSKVRRKIIDLAKALSEEEDLTNKL

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 15654; Mature: 15523

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETRKKPDPIDVYVGTRIRLRRNILGLTQEKLGEKLGITFQQIQKYEKGTNRIGASRLQ
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AIAEIMDVPVSYFFDKGVGTQQVEGFAESDNDFMDFCSSSEGIQLMRAFTNISDSKVRRK
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
IIDLAKALSEEEDLTNKL
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TETRKKPDPIDVYVGTRIRLRRNILGLTQEKLGEKLGITFQQIQKYEKGTNRIGASRLQ
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AIAEIMDVPVSYFFDKGVGTQQVEGFAESDNDFMDFCSSSEGIQLMRAFTNISDSKVRRK
HHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
IIDLAKALSEEEDLTNKL
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8868435 [H]