| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is metK [H]
Identifier: 49475032
GI number: 49475032
Start: 295967
End: 297235
Strand: Reverse
Name: metK [H]
Synonym: BH02200
Alternate gene names: 49475032
Gene position: 297235-295967 (Counterclockwise)
Preceding gene: 49475033
Following gene: 49475031
Centisome position: 15.39
GC content: 40.82
Gene sequence:
>1269_bases ATGTCGCATCAAGATTATCTTTTTACAAGTGAATCAGTATCGGAGGGACATCCTGACAAAATTTGCGATCGTATTTCTGA TGAGATCGTTGATATGATCTATAAAGAAGCTCAAAAAACTGGTACTGATCCATGGTTAGTACGCATCGCTTGCGAAACCT TAGTAAGTATCAACCGCGTTGTTATTGCTGGTGAGGTACGTGTTCCTGATACACTCTTAAAAAGAGATAAAAATAGGGAA TTTATCTACGATGAAACTGGTTTACCACGCATTAATCCTGCACGTTTTCGTGCAGTAGCACGTCGTGCTATTCGTGCAAT TGGTTATGAACAAGTAGGCTTTCATTGGAAAACCGTTAAAATTGATGTTCTTTTGCGCCCACAATCAGTTGACATTGCAC GGGGGGTTGATAATGCTAGGGATCGGCATGATGAAGAAGGAGCAGGTGATCAGGGCATCATGTTCGGATATGCTTGTCGT GAAACACCAGATCTCATGCCCGCGCCAATTTATTATGCACATAAAATTCTCAAACTTCTTGCTGAAGCGCGTCATAAAGG AGAAGGAGAAACTGGAAAATTAGGGCCAGATGCAAAAAGTCAAATAACAATACGGTACAAGAATGGAAAGCCTATAGAAG TAACATCCATCGTTCTTTCTACACAGCATTTAGATGAAAGTTGGGATTCCCATAAAGTCCGCACAGTGGTTGAGCCTTAT ATCCATCAAGCTTTGCATGATATTCCTATTTCCGATCAATGCAGTTGGTATATTAACCCAACAGGAAAATTTGTTATCGG TGGCCCCCAATGTGATGCTGGACTGACAGGACGTAAAATTATCGTTGACACTTATGGAGGTGCAGCCCCCCATGGTGGAG GAGCTTTTTCAGGCAAAGATACAACAAAAGTTGATCGTTCTGCAGCTTATGCTGCACGCTATCTGGCTAAGAATATTGTT GCAGCTGACTTAGCAGAACGATGCACTATTCAACTCTCCTATGCAATCGGCGTTGCACAACCCTTATCCATTTATATTAA TTTCCATGGAACAGGAAAAGTCGATGAAAGTATTATCGAAGCAGTAATCCGGAAAATAATGGATCTTTCACCGACAGGAA TCCGGAAACATTTAGATCTCAACAAACCGATTTATACAAAAACAGCCGCTTATGGTCATTTTGGACGCAAACCAAAACGT GATGGTTCATTTTCATGGGAAAAAACTGATCTCATTAAAACGCTTCAAAAAATGATTAAGGTACCATGA
Upstream 100 bases:
>100_bases TCTCGCTCACCTTATCAATCAACATTGATGATTTGTCATGGGATTGGCAAATAAGGGCAATTTTAATATAGAGTTGGTTT TCTTTGTTTAAGGAGTTCCT
Downstream 100 bases:
>100_bases TTGATCATAATATACGTACAGGTAAGGCCTTTTTTGGTCGTCGAAAAGGAAAACGGCTACGGAACAGTCAGCTTGTACTT ATAAAAAAGCTTTTTCCAAC
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MSHQDYLFTSESVSEGHPDKICDRISDEIVDMIYKEAQKTGTDPWLVRIACETLVSINRVVIAGEVRVPDTLLKRDKNRE FIYDETGLPRINPARFRAVARRAIRAIGYEQVGFHWKTVKIDVLLRPQSVDIARGVDNARDRHDEEGAGDQGIMFGYACR ETPDLMPAPIYYAHKILKLLAEARHKGEGETGKLGPDAKSQITIRYKNGKPIEVTSIVLSTQHLDESWDSHKVRTVVEPY IHQALHDIPISDQCSWYINPTGKFVIGGPQCDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNIV AADLAERCTIQLSYAIGVAQPLSIYINFHGTGKVDESIIEAVIRKIMDLSPTGIRKHLDLNKPIYTKTAAYGHFGRKPKR DGSFSWEKTDLIKTLQKMIKVP
Sequences:
>Translated_422_residues MSHQDYLFTSESVSEGHPDKICDRISDEIVDMIYKEAQKTGTDPWLVRIACETLVSINRVVIAGEVRVPDTLLKRDKNRE FIYDETGLPRINPARFRAVARRAIRAIGYEQVGFHWKTVKIDVLLRPQSVDIARGVDNARDRHDEEGAGDQGIMFGYACR ETPDLMPAPIYYAHKILKLLAEARHKGEGETGKLGPDAKSQITIRYKNGKPIEVTSIVLSTQHLDESWDSHKVRTVVEPY IHQALHDIPISDQCSWYINPTGKFVIGGPQCDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNIV AADLAERCTIQLSYAIGVAQPLSIYINFHGTGKVDESIIEAVIRKIMDLSPTGIRKHLDLNKPIYTKTAAYGHFGRKPKR DGSFSWEKTDLIKTLQKMIKVP >Mature_421_residues SHQDYLFTSESVSEGHPDKICDRISDEIVDMIYKEAQKTGTDPWLVRIACETLVSINRVVIAGEVRVPDTLLKRDKNREF IYDETGLPRINPARFRAVARRAIRAIGYEQVGFHWKTVKIDVLLRPQSVDIARGVDNARDRHDEEGAGDQGIMFGYACRE TPDLMPAPIYYAHKILKLLAEARHKGEGETGKLGPDAKSQITIRYKNGKPIEVTSIVLSTQHLDESWDSHKVRTVVEPYI HQALHDIPISDQCSWYINPTGKFVIGGPQCDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNIVA ADLAERCTIQLSYAIGVAQPLSIYINFHGTGKVDESIIEAVIRKIMDLSPTGIRKHLDLNKPIYTKTAAYGHFGRKPKRD GSFSWEKTDLIKTLQKMIKVP
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=414, Percent_Identity=45.8937198067633, Blast_Score=295, Evalue=5e-80, Organism=Homo sapiens, GI4557737, Length=414, Percent_Identity=44.6859903381643, Blast_Score=288, Evalue=6e-78, Organism=Escherichia coli, GI1789311, Length=413, Percent_Identity=47.9418886198547, Blast_Score=347, Evalue=7e-97, Organism=Caenorhabditis elegans, GI17538498, Length=426, Percent_Identity=42.9577464788732, Blast_Score=293, Evalue=2e-79, Organism=Caenorhabditis elegans, GI17538494, Length=415, Percent_Identity=43.855421686747, Blast_Score=292, Evalue=3e-79, Organism=Caenorhabditis elegans, GI25145633, Length=419, Percent_Identity=42.4821002386635, Blast_Score=284, Evalue=7e-77, Organism=Caenorhabditis elegans, GI17551082, Length=414, Percent_Identity=42.0289855072464, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI32565911, Length=331, Percent_Identity=46.2235649546828, Blast_Score=250, Evalue=1e-66, Organism=Caenorhabditis elegans, GI25145635, Length=324, Percent_Identity=45.3703703703704, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI32565905, Length=301, Percent_Identity=48.5049833887043, Blast_Score=237, Evalue=7e-63, Organism=Caenorhabditis elegans, GI32565903, Length=301, Percent_Identity=48.5049833887043, Blast_Score=236, Evalue=1e-62, Organism=Saccharomyces cerevisiae, GI6320710, Length=413, Percent_Identity=44.5520581113801, Blast_Score=295, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6323209, Length=415, Percent_Identity=43.6144578313253, Blast_Score=294, Evalue=2e-80, Organism=Drosophila melanogaster, GI24580527, Length=412, Percent_Identity=43.9320388349515, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI24580525, Length=412, Percent_Identity=43.9320388349515, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI45552159, Length=412, Percent_Identity=43.6893203883495, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24580529, Length=412, Percent_Identity=43.6893203883495, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24580537, Length=412, Percent_Identity=43.6893203883495, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24580533, Length=412, Percent_Identity=43.6893203883495, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24580535, Length=412, Percent_Identity=43.6893203883495, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24580531, Length=412, Percent_Identity=43.6893203883495, Blast_Score=270, Evalue=2e-72, Organism=Drosophila melanogaster, GI24580541, Length=413, Percent_Identity=41.8886198547215, Blast_Score=252, Evalue=4e-67, Organism=Drosophila melanogaster, GI24580539, Length=148, Percent_Identity=36.4864864864865, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 47024; Mature: 46893
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQDYLFTSESVSEGHPDKICDRISDEIVDMIYKEAQKTGTDPWLVRIACETLVSINRV CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEE VIAGEVRVPDTLLKRDKNREFIYDETGLPRINPARFRAVARRAIRAIGYEQVGFHWKTVK EEEECCCCCHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEEEE IDVLLRPQSVDIARGVDNARDRHDEEGAGDQGIMFGYACRETPDLMPAPIYYAHKILKLL EEEEECCCCCHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH AEARHKGEGETGKLGPDAKSQITIRYKNGKPIEVTSIVLSTQHLDESWDSHKVRTVVEPY HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEHHHHHCCCCCCHHHHHHHHH IHQALHDIPISDQCSWYINPTGKFVIGGPQCDAGLTGRKIIVDTYGGAAPHGGGAFSGKD HHHHHHCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC TTKVDRSAAYAARYLAKNIVAADLAERCTIQLSYAIGVAQPLSIYINFHGTGKVDESIIE CCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHH AVIRKIMDLSPTGIRKHLDLNKPIYTKTAAYGHFGRKPKRDGSFSWEKTDLIKTLQKMIK HHHHHHHCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC VP CC >Mature Secondary Structure SHQDYLFTSESVSEGHPDKICDRISDEIVDMIYKEAQKTGTDPWLVRIACETLVSINRV CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEE VIAGEVRVPDTLLKRDKNREFIYDETGLPRINPARFRAVARRAIRAIGYEQVGFHWKTVK EEEECCCCCHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEEEE IDVLLRPQSVDIARGVDNARDRHDEEGAGDQGIMFGYACRETPDLMPAPIYYAHKILKLL EEEEECCCCCHHHHCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH AEARHKGEGETGKLGPDAKSQITIRYKNGKPIEVTSIVLSTQHLDESWDSHKVRTVVEPY HHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEHHHHHCCCCCCHHHHHHHHH IHQALHDIPISDQCSWYINPTGKFVIGGPQCDAGLTGRKIIVDTYGGAAPHGGGAFSGKD HHHHHHCCCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC TTKVDRSAAYAARYLAKNIVAADLAERCTIQLSYAIGVAQPLSIYINFHGTGKVDESIIE CCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHH AVIRKIMDLSPTGIRKHLDLNKPIYTKTAAYGHFGRKPKRDGSFSWEKTDLIKTLQKMIK HHHHHHHCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC VP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA