| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is lnt [H]
Identifier: 49475034
GI number: 49475034
Start: 297921
End: 299555
Strand: Reverse
Name: lnt [H]
Synonym: BH02220
Alternate gene names: 49475034
Gene position: 299555-297921 (Counterclockwise)
Preceding gene: 49475035
Following gene: 49475033
Centisome position: 15.51
GC content: 38.53
Gene sequence:
>1635_bases ATGAAAGTTTTAAACAAAATGTCATCTCCGAAGAGTAACTTCGTGTTTTTAAACAGTGTCAAGATGTCCTTGTTTTCCCT CACTGGTTGGAAACGGCAAGGGGTGTTGTTTTTATGTGGTGCATTGACATCCTTTGCACTTCCGCCCTTTTATTTAACAC CTCTCTGTTTTTTAACTTTTCCTGTCTTCATTGTTTTACTTGATAAAATCAGTGCTCTTCAAAACAATAGAAAATGCCTT CTGATCTACGCTTTAAGCTGTGGAACCTTTGGCTTTGGTTATTTTATTTTTGGTTTTTGGTGGCTGTGTAATGCTTTACT GACAGACCCAATTACTTTTGGATGGGCTGTGCCATTCGCTATTTTCTGCCCTCCCCTTTACCTTTCTCTTTATTGGTTTT TTGCCGGTTTTATTGTCGGTTTTTTATGGACAAAAGGAATAGCACGCTTTTTTATTCTGGCTTTTGCGCTTGGACTAGCA GAATGGTTACGTTCTATTTTATTCACAGGCTTTCCGTGGAATGCTCTTGGTTATACAGCTATGCCAACCCCTATGCTTAT GCAATCCGATGCAATCTTCGGACTGTATGGAATGAATATCCTTGCCGTCTTCATCTACAGTTTACCCACTGTTTTATTCA CAGATGAAAAAAAGAAAACCGCACTTTTTCTTTGCTTAGCGCTGATACTAGCCCACTGTGGTTTTGGATTTTATCGCCTC AATACTGCCCCTAAAATGACTGATTATCAAAAAAGCAGTTATTGGGTGCGCATTGTTCAACCTTCTATAGAGCAAAACAC AAAATTGAGCAATACTGAGCGAGAGGCTATATTTGCAGCTCATATGAATCTAAGTGCAACATCAATAGTGGAACAGCATC CAGAACCCGACTTTATCGTATGGCCTGAAGCATCTATTCCTTATCTTCTCTATGATAACTCTACTATCACAATGCGCATT GCCTCTCTTCTCAAGCCAAAACAATGGGCTATTATTGGTGCTATACGTGCCAGTAATAATCCTCTCAATGAAAAAACGCA GTATTTTAATACAATTGCAGTCATTAATGCTACAGGAAATATTTTAACTACCTCTGATAAACTTCATTTGGTTCCTTTTG GTGAATATCTGCCTTATCAGAATTTATTGAAAAAAATTGGATTGCATGCCCTTGCTGATACTATTGGTGGATATAGTACT GCGAGTGTACGCAAAACTGTTATGATGCCGAATGGATTTTCTTATCTTCCTCTAATCTGTTATGAAGCAATATTTCCTAA TGAAATGGTTTTTAAAGGTTCTCCTCCTCAAGCAATCATTAATGTTACAAATGATGCATGGTTTGGCGTAACACCCGGTC CATACCAACATCTTCAACAAGTGCAGCTTCGTGCAGTTGAACTGGGAATCCCTCTTATAAGAGCAGCCAATAATGGAATA TCAGCTGTCATTGATTCTTATGGACGAATCGTTGTAGCTCTCCAGCAAAATGCTGTTGGCATTGTTGATTCACCAATTCC ATCACCCATTACCCCCATAGGAAACAATGAATACAGGATATTCTCTACTTTCATCTTATTCATTCTTATGCTATTGTGCG GACTCGGTTTTGGTTCTACAAAACAGCTTAAATGA
Upstream 100 bases:
>100_bases AAAGGTGAAATCATTGAAGCGGTGCCAGGTTATCGATTCCGTATTTTAGAAGCTGATAAACGTCGGATTAAGCGCTTACG TATTTTTCGTATTCCGGAGA
Downstream 100 bases:
>100_bases TCGGATGCCCACATTCCGGTACCGTATCATGTGTACCATTAAAGTTGGGAAAAACTATTACATATTGTTTTATTGTATGA TAAATCAACCTCACATAAAT
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MKVLNKMSSPKSNFVFLNSVKMSLFSLTGWKRQGVLFLCGALTSFALPPFYLTPLCFLTFPVFIVLLDKISALQNNRKCL LIYALSCGTFGFGYFIFGFWWLCNALLTDPITFGWAVPFAIFCPPLYLSLYWFFAGFIVGFLWTKGIARFFILAFALGLA EWLRSILFTGFPWNALGYTAMPTPMLMQSDAIFGLYGMNILAVFIYSLPTVLFTDEKKKTALFLCLALILAHCGFGFYRL NTAPKMTDYQKSSYWVRIVQPSIEQNTKLSNTEREAIFAAHMNLSATSIVEQHPEPDFIVWPEASIPYLLYDNSTITMRI ASLLKPKQWAIIGAIRASNNPLNEKTQYFNTIAVINATGNILTTSDKLHLVPFGEYLPYQNLLKKIGLHALADTIGGYST ASVRKTVMMPNGFSYLPLICYEAIFPNEMVFKGSPPQAIINVTNDAWFGVTPGPYQHLQQVQLRAVELGIPLIRAANNGI SAVIDSYGRIVVALQQNAVGIVDSPIPSPITPIGNNEYRIFSTFILFILMLLCGLGFGSTKQLK
Sequences:
>Translated_544_residues MKVLNKMSSPKSNFVFLNSVKMSLFSLTGWKRQGVLFLCGALTSFALPPFYLTPLCFLTFPVFIVLLDKISALQNNRKCL LIYALSCGTFGFGYFIFGFWWLCNALLTDPITFGWAVPFAIFCPPLYLSLYWFFAGFIVGFLWTKGIARFFILAFALGLA EWLRSILFTGFPWNALGYTAMPTPMLMQSDAIFGLYGMNILAVFIYSLPTVLFTDEKKKTALFLCLALILAHCGFGFYRL NTAPKMTDYQKSSYWVRIVQPSIEQNTKLSNTEREAIFAAHMNLSATSIVEQHPEPDFIVWPEASIPYLLYDNSTITMRI ASLLKPKQWAIIGAIRASNNPLNEKTQYFNTIAVINATGNILTTSDKLHLVPFGEYLPYQNLLKKIGLHALADTIGGYST ASVRKTVMMPNGFSYLPLICYEAIFPNEMVFKGSPPQAIINVTNDAWFGVTPGPYQHLQQVQLRAVELGIPLIRAANNGI SAVIDSYGRIVVALQQNAVGIVDSPIPSPITPIGNNEYRIFSTFILFILMLLCGLGFGSTKQLK >Mature_544_residues MKVLNKMSSPKSNFVFLNSVKMSLFSLTGWKRQGVLFLCGALTSFALPPFYLTPLCFLTFPVFIVLLDKISALQNNRKCL LIYALSCGTFGFGYFIFGFWWLCNALLTDPITFGWAVPFAIFCPPLYLSLYWFFAGFIVGFLWTKGIARFFILAFALGLA EWLRSILFTGFPWNALGYTAMPTPMLMQSDAIFGLYGMNILAVFIYSLPTVLFTDEKKKTALFLCLALILAHCGFGFYRL NTAPKMTDYQKSSYWVRIVQPSIEQNTKLSNTEREAIFAAHMNLSATSIVEQHPEPDFIVWPEASIPYLLYDNSTITMRI ASLLKPKQWAIIGAIRASNNPLNEKTQYFNTIAVINATGNILTTSDKLHLVPFGEYLPYQNLLKKIGLHALADTIGGYST ASVRKTVMMPNGFSYLPLICYEAIFPNEMVFKGSPPQAIINVTNDAWFGVTPGPYQHLQQVQLRAVELGIPLIRAANNGI SAVIDSYGRIVVALQQNAVGIVDSPIPSPITPIGNNEYRIFSTFILFILMLLCGLGFGSTKQLK
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=490, Percent_Identity=29.1836734693878, Blast_Score=133, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 60773; Mature: 60773
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLNKMSSPKSNFVFLNSVKMSLFSLTGWKRQGVLFLCGALTSFALPPFYLTPLCFLTF CCCHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH PVFIVLLDKISALQNNRKCLLIYALSCGTFGFGYFIFGFWWLCNALLTDPITFGWAVPFA HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IFCPPLYLSLYWFFAGFIVGFLWTKGIARFFILAFALGLAEWLRSILFTGFPWNALGYTA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC MPTPMLMQSDAIFGLYGMNILAVFIYSLPTVLFTDEKKKTALFLCLALILAHCGFGFYRL CCCCHHCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEE NTAPKMTDYQKSSYWVRIVQPSIEQNTKLSNTEREAIFAAHMNLSATSIVEQHPEPDFIV CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHCCCCCEEE WPEASIPYLLYDNSTITMRIASLLKPKQWAIIGAIRASNNPLNEKTQYFNTIAVINATGN ECCCCCCEEEECCCEEEHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCCC ILTTSDKLHLVPFGEYLPYQNLLKKIGLHALADTIGGYSTASVRKTVMMPNGFSYLPLIC EEEECCCEEEEECHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCHHHHHH YEAIFPNEMVFKGSPPQAIINVTNDAWFGVTPGPYQHLQQVQLRAVELGIPLIRAANNGI HHHHCCCCEEECCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEECCCCH SAVIDSYGRIVVALQQNAVGIVDSPIPSPITPIGNNEYRIFSTFILFILMLLCGLGFGST HHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC KQLK CCCC >Mature Secondary Structure MKVLNKMSSPKSNFVFLNSVKMSLFSLTGWKRQGVLFLCGALTSFALPPFYLTPLCFLTF CCCHHHCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH PVFIVLLDKISALQNNRKCLLIYALSCGTFGFGYFIFGFWWLCNALLTDPITFGWAVPFA HHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH IFCPPLYLSLYWFFAGFIVGFLWTKGIARFFILAFALGLAEWLRSILFTGFPWNALGYTA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC MPTPMLMQSDAIFGLYGMNILAVFIYSLPTVLFTDEKKKTALFLCLALILAHCGFGFYRL CCCCHHCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCEEEE NTAPKMTDYQKSSYWVRIVQPSIEQNTKLSNTEREAIFAAHMNLSATSIVEQHPEPDFIV CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHEEEEEECCCCHHHHHHHCCCCCEEE WPEASIPYLLYDNSTITMRIASLLKPKQWAIIGAIRASNNPLNEKTQYFNTIAVINATGN ECCCCCCEEEECCCEEEHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCCC ILTTSDKLHLVPFGEYLPYQNLLKKIGLHALADTIGGYSTASVRKTVMMPNGFSYLPLIC EEEECCCEEEEECHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHEEEECCCCCCHHHHHH YEAIFPNEMVFKGSPPQAIINVTNDAWFGVTPGPYQHLQQVQLRAVELGIPLIRAANNGI HHHHCCCCEEECCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEECCCCH SAVIDSYGRIVVALQQNAVGIVDSPIPSPITPIGNNEYRIFSTFILFILMLLCGLGFGST HHHHHCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC KQLK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]