| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447561
Identifier: 46447561
GI number: 46447561
Start: 2295124
End: 2295453
Strand: Direct
Name: 46447561
Synonym: pc1927
Alternate gene names: NA
Gene position: 2295124-2295453 (Clockwise)
Preceding gene: 46447560
Following gene: 46447562
Centisome position: 95.06
GC content: 43.64
Gene sequence:
>330_bases TTGACACCCTTAACGGGTTTGCAATATCTATGTCTAAGCTGCTGTGAGAACCTCACCGATGCTGAATTAGCCCATTTGAC ACCCTTAACCGCTTTGCAGTATCTAGATTTAAGCTCTTGTAAGGAAATCACTGATGCGGGATTAGCGCATCTAACACCCT TAACAAGTTTACAGCATTTAGATCTGAGCTACTGTGAAAATCTCACCGATGCAGGGTTAGCCCATTTGGCACCCTTAACG GCTTTGCAGCATCTAGATTTGAGCTACTGTGAAAATCTCACTAAAGATGGATTAACCCGTTTGACAACTACAACAGGCTT GCAGGGTTAG
Upstream 100 bases:
>100_bases TTTCACCGATGCAGGATTAGCGCATTTAACACCCTTAACGGCTTTGCAGCATCTAGATCTAAGCTTTTGTAATAATCTCA CTGGGGATGGATTAGCCCAT
Downstream 100 bases:
>100_bases CGCATTTAACACCCTTAATTGGTTTACAGCATTTAGAGCTGAGTGGATGTGACAAAGTCAAAAAGGTTGGATTAGACCGT TTTAAAATTTTAGCAGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MTPLTGLQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHLDLSYCENLTDAGLAHLAPLT ALQHLDLSYCENLTKDGLTRLTTTTGLQG
Sequences:
>Translated_109_residues MTPLTGLQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHLDLSYCENLTDAGLAHLAPLT ALQHLDLSYCENLTKDGLTRLTTTTGLQG >Mature_108_residues TPLTGLQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHLDLSYCENLTDAGLAHLAPLTA LQHLDLSYCENLTKDGLTRLTTTTGLQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI22748931, Length=90, Percent_Identity=44.4444444444444, Blast_Score=72, Evalue=8e-14, Organism=Drosophila melanogaster, GI17647819, Length=97, Percent_Identity=37.1134020618557, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11746; Mature: 11614
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLTGLQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHL CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC DLSYCENLTDAGLAHLAPLTALQHLDLSYCENLTKDGLTRLTTTTGLQG CHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPLTGLQYLCLSCCENLTDAELAHLTPLTALQYLDLSSCKEITDAGLAHLTPLTSLQHL CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC DLSYCENLTDAGLAHLAPLTALQHLDLSYCENLTKDGLTRLTTTTGLQG CHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA